RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SPATA31D4Q6ZUB0 917 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 GPR152Q8TDT2 470 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 RIN2Q8WYP3 895 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-227ENST00000485102 PIK3R5Q8WYR1 880 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 BORCS6Q96GS4 357 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 FZD8Q9H461 694 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 TBC1D17Q9HA65 648 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 GJB4Q9NTQ9 266 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 SF3B1O75533 1304 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC6-227ENST00000485102 STK25O00506 426 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 B4GALT5O43286 388 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 TADA2AO75478 443 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 CTDNEP1O95476 244 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 POU2F2P09086 479 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 AKAP5P24588 427 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 STARD6P59095 220 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 TUSC3Q13454 348 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 HSP90AA2PQ14568 343 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-227ENST00000485102 RTL10Q7L3V2 364 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 MTMR9Q96QG7 549 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 TTC12Q9H892 705 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-227ENST00000485102 ARHGEF3Q9NR81 526 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 PRMT7Q9NVM4 692 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-227ENST00000485102 ORC3Q9UBD5 711 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-227ENST00000485102 TPCN1Q9ULQ1 816 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 SIT1Q9Y3P8 196 aa14.43□□□□□ -0.1
HDAC6-227ENST00000485102 DNAH14Q0VDD8 3507 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 FDPSP14324 419 aaKnown RBP14.42□□□□□ -0.1
HDAC6-227ENST00000485102 KRT2P35908 639 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 ELAVL2Q12926 359 aaKnown RBP14.42□□□□□ -0.1
HDAC6-227ENST00000485102 NR5A1Q13285 461 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 CALCRLQ16602 461 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 RTP2Q5QGT7 225 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 CDCA2Q69YH5 1023 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-227ENST00000485102 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 C1orf210Q8IVY1 113 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 MCPH1Q8NEM0 835 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-227ENST00000485102 SHDQ96IW2 340 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 B3GALT6Q96L58 329 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 CLSTN3Q9BQT9 956 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 TTPALQ9BTX7 342 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 APOL6Q9BWW8 343 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 BRMS1Q9HCU9 246 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 CDH7Q9ULB5 785 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 CA14Q9ULX7 337 aa14.42□□□□□ -0.1
HDAC6-227ENST00000485102 F5P12259 2224 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 NPTXRO95502 500 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 SPATA31C1P0DKV0 1188 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 FSHRP23945 695 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 ANKRD1Q15327 319 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 NAB2Q15742 525 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 DCLRE1AQ6PJP8 1040 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 ZC3H14Q6PJT7 736 aaKnown RBP14.41□□□□□ -0.1
HDAC6-227ENST00000485102 GET4Q7L5D6 327 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-227ENST00000485102 PAAF1Q9BRP4 392 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 DDX23Q9BUQ8 820 aaKnown RBP14.41□□□□□ -0.1
HDAC6-227ENST00000485102 OSBPL6Q9BZF3 934 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 POLR3FQ9H1D9 316 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-227ENST00000485102 PARP2Q9UGN5 583 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 NUMBLQ9Y6R0 609 aa14.41□□□□□ -0.1
HDAC6-227ENST00000485102 PTGESO14684 152 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 THP07101 528 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 MYBP10242 640 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
HDAC6-227ENST00000485102 RFX1P22670 979 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 ANAPC15P60006 121 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 RAB33AQ14088 237 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 PRSS55Q6UWB4 352 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-227ENST00000485102 RSPO2Q6UXX9 243 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-227ENST00000485102 MTSS1LQ765P7 747 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 CDR2LQ86X02 465 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-227ENST00000485102 PJA1Q8NG27 643 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 FGF14Q92915 247 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 CCDC43Q96MW1 224 aaKnown RBP14.4□□□□□ -0.1
HDAC6-227ENST00000485102 C2orf40Q9H1Z8 148 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 TUFT1Q9NNX1 390 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 DMXL1Q9Y485 3027 aa14.4□□□□□ -0.1
HDAC6-227ENST00000485102 NOTCH4Q99466 2003 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 TMEM189-UBE2V1I3L0A0 370 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 N4BP3O15049 544 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 NEMFO60524 1076 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 DCNP07585 359 aaKnown RBP14.39□□□□□ -0.11
HDAC6-227ENST00000485102 SP9P0CG40 484 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 GLULP15104 373 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 TXKP42681 527 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 RBM25P49756 843 aaKnown RBP14.39□□□□□ -0.11
HDAC6-227ENST00000485102 GPC5P78333 572 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 PRKCQQ04759 706 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 PSMD5Q16401 504 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 ZNF528Q3MIS6 628 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 LIN9Q5TKA1 542 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 PARM1Q6UWI2 310 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms