RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 ARHGAP28Q9P2N2 729 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 GRIN2DO15399 1336 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 AREL1O15033 823 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 ZBTB5O15062 677 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 KIF1CO43896 1103 aaKnown RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 SUPT20HL2P0C7V6 817 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 SMPD1P17405 629 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 TAL1P17542 331 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 ADCYAP1R1P41586 468 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 GIPRP48546 466 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 SH3BGRP55822 239 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 ZNF267Q14586 743 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 KCNA10Q16322 511 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 SLC10A6Q3KNW5 377 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 MAP4K3Q8IVH8 894 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 ANKRD35Q8N283 1001 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 GIMAP1Q8WWP7 306 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 POLR3CQ9BUI4 534 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 NPHS2Q9NP85 383 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 IL23AQ9NPF7 189 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 ITM2CQ9NQX7 267 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 MTMR10Q9NXD2 777 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 FOXD3Q9UJU5 478 aaPredicted RBP5.84□□□□□ -1.48
CCDC39-205ENST00000485055 BLOC1S6Q9UL45 172 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 CCPG1Q9ULG6 757 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 MAP4K5Q9Y4K4 846 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 SQORQ9Y6N5 450 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 MICAL3Q7RTP6 2002 aa5.84□□□□□ -1.48
CCDC39-205ENST00000485055 FSD2A1L4K1 749 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 DCDC2CA8MYV0 355 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TPP1O14773 563 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TBX18O95935 607 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 ALAS1P13196 640 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CNTFP26441 200 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 ISM2Q6H9L7 571 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 LRRC69Q6ZNQ3 347 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 SPATS2Q86XZ4 545 aaKnown RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 ADGRF4Q8IZF3 695 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CPA6Q8N4T0 437 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 NCOA7Q8NI08 942 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 RHOVQ96L33 236 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CCDC138Q96M89 665 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TBCBQ99426 244 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 MTG1Q9BT17 334 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CCDC94Q9BW85 323 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 GLT8D2Q9H1C3 349 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 LMCD1Q9NZU5 365 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 EMSYQ7Z589 1322 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 SOX1O00570 391 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 EFCAB14O75071 495 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 F12P00748 615 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 PGK2P07205 417 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CYP21A2P08686 494 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 ABCD1P33897 745 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 MAN2A2P49641 1150 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 MRPL28Q13084 256 aaKnown RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 FSCN1Q16658 493 aaKnown RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TRIM60Q495X7 471 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 RNF207Q6ZRF8 634 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 OTUD6AQ7L8S5 288 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 VSIG10LQ86VR7 867 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CEP57L1Q8IYX8 460 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 PPTC7Q8NI37 304 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 CAGE1Q8TC20 777 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TTC17Q96AE7 1141 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 AMNQ9BXJ7 453 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TMEM121BQ9BXQ6 578 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 SENP6Q9GZR1 1112 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-205ENST00000485055 TTLL3Q9Y4R7 772 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 PDE4DIPQ5VU43 2346 aa5.83□□□□□ -1.48
CCDC39-205ENST00000485055 ATG2AQ2TAZ0 1938 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NLRC5Q86WI3 1866 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ESYT2A0FGR8 921 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TMEM229AB2RXF0 380 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 E7EWF7 191 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 RANBP6O60518 1105 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NMT2O60551 498 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 GREM1O60565 184 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CPNE3O75131 537 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 B3GALNT1O75752 331 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 EOMESO95936 686 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PF4P02776 101 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ASGR1P07306 291 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 RHCEP18577 417 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PRPHP41219 470 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NPTX2P47972 431 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TUBP50607 506 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ANTXR2P58335 489 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 RHDQ02161 417 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TLE2Q04725 743 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FPGSQ05932 587 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ARHGAP1Q07960 439 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 SLC35G1Q2M3R5 365 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TRIM71Q2Q1W2 868 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FAM205BPQ63HN1 556 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 SHQ1Q6PI26 577 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CCDC149Q6ZUS6 474 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms