RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-206ENST00000484733 TADA2AO75478 443 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 PDGFBP01127 241 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-206ENST00000484733 EFNA5P52803 228 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 TDGQ13569 410 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 STAMQ92783 540 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 ZNF707Q96C28 371 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-206ENST00000484733 KIF2CQ99661 725 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 EPS15L1Q9UBC2 864 aa12.65□□□□□ -0.38
SCFD1-206ENST00000484733 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 CCT6AP40227 531 aaKnown RBP12.65□□□□□ -0.39
SCFD1-206ENST00000484733 CLCN5P51795 746 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 NAB2Q15742 525 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 ECM1Q16610 540 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.39
SCFD1-206ENST00000484733 DEPTORQ8TB45 409 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 NXPE3Q969Y0 559 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 IFT74Q96LB3 600 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 SMOC2Q9H3U7 446 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 SNTG2Q9NY99 539 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 DUSP12Q9UNI6 340 aa12.65□□□□□ -0.39
SCFD1-206ENST00000484733 CLUHO75153 1309 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.393e-6■■■■■ 57.3
SCFD1-206ENST00000484733 PTGESO14684 152 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 TGM5O43548 720 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 THP07101 528 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 IGSF22Q8N9C0 903 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
SCFD1-206ENST00000484733 KCNK12Q9HB15 430 aa12.64□□□□□ -0.39
SCFD1-206ENST00000484733 LAD1O00515 517 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 EDN1P05305 212 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PIK3R5Q8WYR1 880 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 SMG7Q92540 1137 aaKnown RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PHLPP2Q6ZVD8 1323 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 TMEM189-UBE2V1I3L0A0 370 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 N4BP1O75113 896 aaKnown RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 ZMYND10O75800 440 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 RECQL4O94761 1208 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PRPHP41219 470 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
SCFD1-206ENST00000484733 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PALB2Q86YC2 1186 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 PAAF1Q9BRP4 392 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
SCFD1-206ENST00000484733 RFPL2O75678 378 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 POU2F2P09086 479 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
SCFD1-206ENST00000484733 B3GALT6Q96L58 329 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 UROC1Q96N76 676 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 TMEM134Q9H6X4 195 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 KIAA1024Q9UPX6 916 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 TNFSF13BQ9Y275 285 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 PROB1E7EW31 1015 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 KIF4AO95239 1232 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 PTGDRQ13258 359 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 ATF7IP2Q5U623 682 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 RTL10Q7L3V2 364 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 CLSTN3Q9BQT9 956 aa12.62□□□□□ -0.39
SCFD1-206ENST00000484733 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
SCFD1-206ENST00000484733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCFD1-206ENST00000484733 ZFP37Q9Y6Q3 630 aaPredicted RBP12.62□□□□□ -0.39
SCFD1-206ENST00000484733 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 HNRNPA1P09651 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 SPATA31D3P0C874 917 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 NPR3P17342 541 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 HOXA9P31269 272 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PRSS55Q6UWB4 352 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 SPATA31D4Q6ZUB0 917 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 SNX29Q8TEQ0 813 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 RABGGTAQ92696 567 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PPP1R10Q96QC0 940 aaKnown RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 MYADMQ96S97 322 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms