RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 ALKBH5Q6P6C2 394 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 LRIG3Q6UXM1 1119 aa8.8□□□□□ -1
SORT1-205ENST00000483508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
SORT1-205ENST00000483508 ZNF571Q7Z3V5 609 aaPredicted RBP8.8□□□□□ -1
SORT1-205ENST00000483508 SLFN11Q7Z7L1 901 aa8.8□□□□□ -1
SORT1-205ENST00000483508 FAM126BQ8IXS8 530 aa8.8□□□□□ -1
SORT1-205ENST00000483508 FAM186BQ8IYM0 893 aa8.8□□□□□ -1
SORT1-205ENST00000483508 RPUSD2Q8IZ73 545 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 LRRC57Q8N9N7 239 aa8.8□□□□□ -1
SORT1-205ENST00000483508 SCFD2Q8WU76 684 aa8.8□□□□□ -1
SORT1-205ENST00000483508 HDAC7Q8WUI4 952 aa8.8□□□□□ -1
SORT1-205ENST00000483508 SLC5A5Q92911 643 aa8.8□□□□□ -1
SORT1-205ENST00000483508 SLC35C1Q96A29 364 aa8.8□□□□□ -1
SORT1-205ENST00000483508 NACC1Q96RE7 527 aa8.8□□□□□ -1
SORT1-205ENST00000483508 MPHOSPH6Q99547 160 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 RUSC1Q9BVN2 902 aa8.8□□□□□ -1
SORT1-205ENST00000483508 CAPS2Q9BXY5 557 aa8.8□□□□□ -1
SORT1-205ENST00000483508 WDR11Q9BZH6 1224 aa8.8□□□□□ -1
SORT1-205ENST00000483508 BHMT2Q9H2M3 363 aa8.8□□□□□ -1
SORT1-205ENST00000483508 HIPK3Q9H422 1215 aa8.8□□□□□ -1
SORT1-205ENST00000483508 SIX2Q9NPC8 291 aa8.8□□□□□ -1
SORT1-205ENST00000483508 IL23AQ9NPF7 189 aa8.8□□□□□ -1
SORT1-205ENST00000483508 A1CFQ9NQ94 594 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 GCNT4Q9P109 453 aa8.8□□□□□ -1
SORT1-205ENST00000483508 SUCLA2Q9P2R7 463 aaPredicted RBP8.8□□□□□ -1
SORT1-205ENST00000483508 TBX21Q9UL17 535 aa8.8□□□□□ -1
SORT1-205ENST00000483508 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
SORT1-205ENST00000483508 MRPL11Q9Y3B7 192 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 RANBP2P49792 3224 aaKnown RBP8.8□□□□□ -1
SORT1-205ENST00000483508 ZMYM2Q9UBW7 1377 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 ZBBXA8MT70 800 aa8.79□□□□□ -1
SORT1-205ENST00000483508 GRXCR1A8MXD5 290 aa8.79□□□□□ -1
SORT1-205ENST00000483508 BHMG1C9JSJ3 638 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 MYO1CO00159 1063 aa8.79□□□□□ -1
SORT1-205ENST00000483508 MEIS1O00470 390 aa8.79□□□□□ -1
SORT1-205ENST00000483508 OPLAHO14841 1288 aa8.79□□□□□ -1
SORT1-205ENST00000483508 ADCY6O43306 1168 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PSMD10O75832 226 aa8.79□□□□□ -1
SORT1-205ENST00000483508 POLR2MP0CAP2 368 aa8.79□□□□□ -1
SORT1-205ENST00000483508 MAPTP10636 758 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 ACTN1P12814 892 aa8.79□□□□□ -1
SORT1-205ENST00000483508 HSPA9P38646 679 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 NOP2P46087 812 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 ZNF131P52739 623 aa8.79□□□□□ -1
SORT1-205ENST00000483508 CCL23P55773 120 aa8.79□□□□□ -1
SORT1-205ENST00000483508 GUCY2DQ02846 1103 aa8.79□□□□□ -1
SORT1-205ENST00000483508 ARID5AQ03989 594 aa8.79□□□□□ -1
SORT1-205ENST00000483508 USH1GQ495M9 461 aa8.79□□□□□ -1
SORT1-205ENST00000483508 BRDTQ58F21 947 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 EMC10Q5UCC4 262 aa8.79□□□□□ -1
SORT1-205ENST00000483508 LRCH2Q5VUJ6 765 aa8.79□□□□□ -1
SORT1-205ENST00000483508 TCERG1LQ5VWI1 586 aa8.79□□□□□ -1
SORT1-205ENST00000483508 C1orf186Q6ZWK4 172 aa8.79□□□□□ -1
SORT1-205ENST00000483508 HS2ST1Q7LGA3 356 aa8.79□□□□□ -1
SORT1-205ENST00000483508 OTOP2Q7RTS6 562 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SPATS2Q86XZ4 545 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
SORT1-205ENST00000483508 RASGEF1CQ8N431 466 aa8.79□□□□□ -1
SORT1-205ENST00000483508 TSEN2Q8NCE0 465 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
SORT1-205ENST00000483508 LRRC45Q96CN5 670 aa8.79□□□□□ -1
SORT1-205ENST00000483508 BORCS6Q96GS4 357 aa8.79□□□□□ -1
SORT1-205ENST00000483508 MS4A14Q96JA4 679 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PSMB7Q99436 277 aa8.79□□□□□ -1
SORT1-205ENST00000483508 KRT12Q99456 494 aa8.79□□□□□ -1
SORT1-205ENST00000483508 HSD17B14Q9BPX1 270 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PACSIN1Q9BY11 444 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SEZ6LQ9BYH1 1024 aa8.79□□□□□ -1
SORT1-205ENST00000483508 STK33Q9BYT3 514 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PBX4Q9BYU1 374 aa8.79□□□□□ -1
SORT1-205ENST00000483508 ISCUQ9H1K1 167 aa8.79□□□□□ -1
SORT1-205ENST00000483508 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 RASSF4Q9H2L5 321 aa8.79□□□□□ -1
SORT1-205ENST00000483508 RANBP17Q9H2T7 1088 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 PRDM12Q9H4Q4 367 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SLITRK6Q9H5Y7 841 aa8.79□□□□□ -1
SORT1-205ENST00000483508 SLC28A3Q9HAS3 691 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PARVGQ9HBI0 331 aa8.79□□□□□ -1
SORT1-205ENST00000483508 EPB41L5Q9HCM4 733 aa8.79□□□□□ -1
SORT1-205ENST00000483508 EHD2Q9NZN4 543 aa8.79□□□□□ -1
SORT1-205ENST00000483508 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
SORT1-205ENST00000483508 FRMD4BQ9Y2L6 1034 aa8.79□□□□□ -1
SORT1-205ENST00000483508 PCDHB13Q9Y5F0 798 aa8.79□□□□□ -1
SORT1-205ENST00000483508 ATXN2Q99700 1313 aaKnown RBP8.79□□□□□ -1
SORT1-205ENST00000483508 LCTP09848 1927 aa8.78□□□□□ -1
SORT1-205ENST00000483508 HMGB1P1B2RPK0 211 aaPredicted RBP8.78□□□□□ -1
SORT1-205ENST00000483508 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
SORT1-205ENST00000483508 EML1O00423 815 aa8.78□□□□□ -1
SORT1-205ENST00000483508 KCNK3O14649 394 aa8.78□□□□□ -1
SORT1-205ENST00000483508 EIF3HO15372 352 aaKnown RBP eCLIP8.78□□□□□ -1
SORT1-205ENST00000483508 TGFB1I1O43294 461 aa8.78□□□□□ -1
SORT1-205ENST00000483508 GAS7O60861 476 aa8.78□□□□□ -1
SORT1-205ENST00000483508 GLI1P08151 1106 aa8.78□□□□□ -1
SORT1-205ENST00000483508 MYL3P08590 195 aa8.78□□□□□ -1
SORT1-205ENST00000483508 TMEM253P0C7T8 217 aa8.78□□□□□ -1
SORT1-205ENST00000483508 SUPT20HL2P0C7V6 817 aa8.78□□□□□ -1
SORT1-205ENST00000483508 SMPD1P17405 629 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms