RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 SAMD15Q9P1V8 674 aa4.94□□□□□ -1.62
RPA3-207ENST00000483031 CHST2Q9Y4C5 530 aa4.94□□□□□ -1.62
RPA3-207ENST00000483031 SYNMO15061 1565 aa4.94□□□□□ -1.62
RPA3-207ENST00000483031 NEURL4Q96JN8 1562 aa4.94□□□□□ -1.62
RPA3-207ENST00000483031 MED14O60244 1454 aa4.94□□□□□ -1.62
RPA3-207ENST00000483031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.93□□□□□ -1.62
RPA3-207ENST00000483031 B4E1Z4 1266 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 DIRC3C9JPN6 131 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 E9PSI1 815 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 NPHP4O75161 1426 aaPredicted RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 APOL3O95236 402 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 POLR1AO95602 1720 aaPredicted RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 CFBP00751 764 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 CASRP41180 1078 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 FOXI1Q12951 378 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 MEX3CQ5U5Q3 659 aaKnown RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 PHYKPLQ8IUZ5 450 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 AFAP1Q8N556 730 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 SRPK1Q96SB4 655 aaKnown RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 SOX7Q9BT81 388 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 DKK2Q9UBU2 259 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 DIP2CQ9Y2E4 1556 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 ARHGEF17Q96PE2 2063 aaPredicted RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 DNMT1P26358 1616 aaKnown RBP4.93□□□□□ -1.62
RPA3-207ENST00000483031 MLH3Q9UHC1 1453 aa4.93□□□□□ -1.62
RPA3-207ENST00000483031 CDK13Q14004 1512 aaKnown RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 KDM5CP41229 1560 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 PTPDC1A2A3K4 754 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 PIPSLA2A3N6 862 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 PRR5-ARHGAP8B1AHC4 643 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 LEFTY2O00292 366 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 DNAJC8O75937 253 aaPredicted RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 RANGAP1P46060 587 aaPredicted RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 PTH2RP49190 550 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 DDB1Q16531 1140 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 ABHD17BQ5VST6 288 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 CREB3L3Q68CJ9 461 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 KIAA1841Q6NSI8 718 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 FAM98AQ8NCA5 519 aaKnown RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 PIK3C3Q8NEB9 887 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 SLC9A6Q92581 669 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 CABP5Q9NP86 173 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 TESQ9UGI8 421 aaKnown RBP4.92□□□□□ -1.62
RPA3-207ENST00000483031 FRMD4BQ9Y2L6 1034 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 LRP5O75197 1615 aa4.92□□□□□ -1.62
RPA3-207ENST00000483031 PRPF6O94906 941 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 HLA-DOAP06340 250 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 SPATA31D3P0C874 917 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 HSP90B1P14625 803 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 ZSCAN20P17040 1043 aaPredicted RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 DDX6P26196 483 aaKnown RBP eCLIP4.91□□□□□ -1.62
RPA3-207ENST00000483031 IGFALSP35858 605 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 GZMKP49863 264 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 RNASE9P60153 205 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 RBM6P78332 1123 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 NHLH2Q02577 135 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 FNDC3BQ53EP0 1204 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 ESRP1Q6NXG1 681 aaKnown RBP4.91□□□□□ -1.62
RPA3-207ENST00000483031 UNQ6494/PRO21346Q6UXR6 183 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 SPATA31D4Q6ZUB0 917 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 MICALCLQ6ZW33 695 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 LRFN3Q9BTN0 628 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 MYL10Q9BUA6 226 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 B4GALT6Q9UBX8 382 aa4.91□□□□□ -1.62
RPA3-207ENST00000483031 RAPGEF6Q8TEU7 1601 aa4.9□□□□□ -1.62
RPA3-207ENST00000483031 MYADML2A6NDP7 307 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 UNC119BA6NIH7 251 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 PROB1E7EW31 1015 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 ESRRBO95718 433 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 ASLP04424 464 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 PLA2G5P39877 138 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 DUSP2Q05923 314 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 ZNF460Q14592 562 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 XYLT1Q86Y38 959 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 PPP1R14CQ8TAE6 165 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 CAGE1Q8TC20 777 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 POFUT1Q9H488 388 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 SPON1Q9HCB6 807 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 USP36Q9P275 1121 aaKnown RBP4.9□□□□□ -1.63
RPA3-207ENST00000483031 TLK1Q9UKI8 766 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 DEPDC5O75140 1603 aa4.9□□□□□ -1.63
RPA3-207ENST00000483031 RGS12O14924 1447 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 FGD6Q6ZV73 1430 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 NUP153P49790 1475 aaKnown RBP4.89□□□□□ -1.63
RPA3-207ENST00000483031 LRRC9Q6ZRR7 1453 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 STRCP1A6NGW2 1772 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 KDM5DQ9BY66 1539 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 CBX4O00257 560 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 SLC9A1P19634 815 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 CD69Q07108 199 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 MPP3Q13368 585 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 GPRIN1Q7Z2K8 1008 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 ELF4Q99607 663 aaPredicted RBP4.89□□□□□ -1.63
RPA3-207ENST00000483031 INTS7Q9NVH2 962 aaKnown RBP4.89□□□□□ -1.63
RPA3-207ENST00000483031 LRP6O75581 1613 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 ABCA6Q8N139 1617 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 CTTNBP2Q8WZ74 1663 aa4.89□□□□□ -1.63
RPA3-207ENST00000483031 ROBO1Q9Y6N7 1651 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms