RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 KLHL3Q9UH77 587 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 SRPK3Q9UPE1 567 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ASTN2O75129 1339 aaPredicted RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 MCM3APO60318 1980 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 DDX3XO00571 662 aaKnown RBP eCLIP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 PHKA2P46019 1235 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ADCY7P51828 1080 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 JAK3P52333 1124 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 MAPK10P53779 464 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 PGM5Q15124 567 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 TAPT1Q6NXT6 567 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ZNF449Q6P9G9 518 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 SYTL5Q8TDW5 730 aaPredicted RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 TBC1D20Q96BZ9 403 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ZFRQ96KR1 1074 aaKnown RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 AGO4Q9HCK5 861 aaKnown RBP8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ITM2CQ9NQX7 267 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ABCF2Q9UG63 623 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 ODF2LQ9ULJ1 636 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 RABL2BQ9UNT1 228 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 POLHQ9Y253 713 aa8.51□□□□□ -1.05
TVP23B-203ENST00000482741 MUC22E2RYF6 1773 aaPredicted RBP8.5□□□□□ -1.05
TVP23B-203ENST00000482741 POLBP06746 335 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 XKR4Q5GH76 650 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 GRIN3AQ8TCU5 1115 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 PTPN18Q99952 460 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 ACAD9Q9H845 621 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 DDX19AQ9NUU7 478 aaKnown RBP8.5□□□□□ -1.05
TVP23B-203ENST00000482741 DNM3Q9UQ16 869 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 TDRD15B5MCY1 1934 aaKnown RBP8.5□□□□□ -1.05
TVP23B-203ENST00000482741 B4DLN1 442 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 RPN1P04843 607 aaKnown RBP8.5□□□□□ -1.05
TVP23B-203ENST00000482741 POU2F2P09086 479 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 GRIA4P48058 902 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 NOGQ13253 232 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 KIAA0753Q2KHM9 967 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 MYLK4Q86YV6 388 aaPredicted RBP8.5□□□□□ -1.05
TVP23B-203ENST00000482741 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 ADCY4Q8NFM4 1077 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 SH3KBP1Q96B97 665 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 FIZ1Q96SL8 496 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 DESI2Q9BSY9 194 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 MYLK2Q9H1R3 596 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 MAPRE3Q9UPY8 281 aa8.5□□□□□ -1.05
TVP23B-203ENST00000482741 J3KRW8 73 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 IKBKBO14920 756 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CYBAP13498 195 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 RPA1P27694 616 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 GJA9P57773 515 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SF1Q15637 639 aaKnown RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 TIGD6Q17RP2 521 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SYNE3Q6ZMZ3 975 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 FBXO11Q86XK2 927 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CAMKK1Q8N5S9 505 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 TNPO1Q92973 898 aaKnown RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 FUBP3Q96I24 572 aaKnown RBP eCLIP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 MKS1Q9NXB0 559 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 GPR52Q9Y2T5 361 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 ASB14A6NK59 587 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SMIM22K7EJ46 135 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 ECEL1O95672 775 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 IL2RAP01589 272 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 ATICP31939 592 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 INPP5BP32019 993 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CDC42EP1Q00587 391 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 ZCWPW2Q504Y3 356 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SPATC1LQ9H0A9 340 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CLSTN2Q9H4D0 955 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 BRD9Q9H8M2 597 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 MTCL1Q9Y4B5 1905 aaKnown RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 COL4A3Q01955 1670 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CYP2D7A0A087X1C5 515 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 NCKAP1LP55160 1127 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 EPHA7Q15375 998 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 NEK8Q86SG6 692 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 TBC1D1Q86TI0 1168 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SLITRK4Q8IW52 837 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 CBARPQ8N350 705 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 ZNF513Q8N8E2 541 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-203ENST00000482741 MYO19Q96H55 970 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 SMYD2Q9NRG4 433 aa8.49□□□□□ -1.05
TVP23B-203ENST00000482741 KLRC4O43908 158 aa8.48□□□□□ -1.05
TVP23B-203ENST00000482741 SUSD5O60279 629 aa8.48□□□□□ -1.05
TVP23B-203ENST00000482741 DKC1O60832 514 aaKnown RBP eCLIP8.48□□□□□ -1.05
TVP23B-203ENST00000482741 MTHFD1P11586 935 aaKnown RBP8.48□□□□□ -1.05
TVP23B-203ENST00000482741 PROZP22891 400 aa8.48□□□□□ -1.05
TVP23B-203ENST00000482741 HERVK_113P62684 666 aa8.48□□□□□ -1.05
TVP23B-203ENST00000482741 WASHC5Q12768 1159 aa8.48□□□□□ -1.05
TVP23B-203ENST00000482741 NONOQ15233 471 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms