RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 AFMP43652 599 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 SCNN1GP51170 649 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ZC2HC1CQ53FD0 456 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-214ENST00000482733 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
HMGN1-214ENST00000482733 SLFN12LQ6IEE8 588 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ZNF280BQ86YH2 543 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 SLC39A11Q8N1S5 342 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GSTCDQ8NEC7 633 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ZBTB45Q96K62 511 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ACAP3Q96P50 834 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ACCSQ96QU6 501 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GBP3Q9H0R5 595 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 KLK14Q9P0G3 267 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 TBC1D7Q9P0N9 293 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GDAQ9Y2T3 454 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 DDHD2O94830 711 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 HARSP12081 509 aaKnown RBP18.14■□□□□ 0.49
HMGN1-214ENST00000482733 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 POF1BQ8WVV4 589 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 TMEM169Q96HH4 297 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 BLZF1Q9H2G9 400 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 TMEM206Q9H813 350 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 MIOSQ9NXC5 875 aa18.14■□□□□ 0.49
HMGN1-214ENST00000482733 ZNF202O95125 648 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 THP07101 528 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 PBX3P40426 434 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 SLC11A1P49279 550 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 DSC1Q08554 894 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 CUL4BQ13620 913 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 POSTNQ15063 836 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 PDE12Q6L8Q7 609 aaKnown RBP18.13■□□□□ 0.49
HMGN1-214ENST00000482733 KANK3Q6NY19 840 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 KRBA2Q6ZNG9 492 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 COLGALT2Q8IYK4 626 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 CEP120Q8N960 986 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 GOLPH3LQ9H4A5 285 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 NSUN3Q9H649 340 aaKnown RBP18.13■□□□□ 0.49
HMGN1-214ENST00000482733 DNAJB4Q9UDY4 337 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 FAN1Q9Y2M0 1017 aa18.13■□□□□ 0.49
HMGN1-214ENST00000482733 A0A0B4J269 797 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 OGTO15294 1046 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 CLTAP09496 248 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 MYBP10242 640 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 OSTNP61366 133 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 TUSC3Q13454 348 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
HMGN1-214ENST00000482733 XKR4Q5GH76 650 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 FAM26FQ5R3K3 315 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 SYCP3Q8IZU3 236 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 PPP2R3CQ969Q6 453 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 IGSF21Q96ID5 467 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 MSTO1Q9BUK6 570 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 TLR9Q9NR96 1032 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 STYXL1Q9Y6J8 313 aa18.12■□□□□ 0.49
HMGN1-214ENST00000482733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 PTGESO14684 152 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 NRP1O14786 923 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 B4GALT3O60512 393 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 CASP1P29466 404 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 OR1G1P47890 313 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 CASP5P51878 434 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 EHHADHQ08426 723 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 CAMK1Q14012 370 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 SLC39A4Q6P5W5 647 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 ALKAL1Q6UXT8 129 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 GRAMD1CQ8IYS0 662 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 PPM1EQ8WY54 764 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 SNX27Q96L92 541 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 COLEC11Q9BWP8 271 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 HAPLN2Q9GZV7 340 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 PLEKHA5Q9HAU0 1116 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 NGRNQ9NPE2 291 aaKnown RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 SLC38A7Q9NVC3 462 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-214ENST00000482733 MYH11P35749 1972 aa18.11■□□□□ 0.49
HMGN1-214ENST00000482733 NLRC5Q86WI3 1866 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 COL4A4P53420 1690 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-214ENST00000482733 UBE4BO95155 1302 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 PRPF6O94906 941 aaKnown RBP18.1■□□□□ 0.49
HMGN1-214ENST00000482733 KCNE1P15382 129 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 DNAJB1P25685 340 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 POU5F1Q01860 360 aaKnown RBP18.1■□□□□ 0.49
HMGN1-214ENST00000482733 FAM160A1Q05DH4 1040 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 PSMD2Q13200 908 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
HMGN1-214ENST00000482733 FMR1NBQ8N0W7 255 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-214ENST00000482733 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 MICAL1Q8TDZ2 1067 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 TSPAN18Q96SJ8 248 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 FGFBP2Q9BYJ0 223 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 EXOC1Q9NV70 894 aa18.1■□□□□ 0.49
HMGN1-214ENST00000482733 CNTN3Q9P232 1028 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms