RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 ZNF568Q3ZCX4 644 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 NTPCRQ9BSD7 190 aaKnown RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 COLEC11Q9BWP8 271 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 APOL5Q9BWW9 433 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 CXCL16Q9H2A7 254 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 MARCH5Q9NX47 278 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 LARSQ9P2J5 1176 aaKnown RBP18.18■□□□□ 0.5
VAMP4-204ENST00000482519 ANKFY1Q9P2R3 1169 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 CACNG4Q9UBN1 327 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 ODF2LQ9ULJ1 636 aa18.18■□□□□ 0.5
VAMP4-204ENST00000482519 C2CD2LO14523 706 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 MBTPS2O43462 519 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 CLASP2O75122 1294 aaKnown RBP18.17■□□□□ 0.5
VAMP4-204ENST00000482519 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
VAMP4-204ENST00000482519 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
VAMP4-204ENST00000482519 SMAD4Q13485 552 aaKnown RBP18.17■□□□□ 0.5
VAMP4-204ENST00000482519 GIT2Q14161 759 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 FAM178BQ8IXR5 827 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 BICD1Q96G01 975 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 CDT1Q9H211 546 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
VAMP4-204ENST00000482519 MYH15Q9Y2K3 1946 aa18.17■□□□□ 0.5
VAMP4-204ENST00000482519 CASTOR2A6NHX0 329 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 PTGESO14684 152 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 THP07101 528 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 YARSP54577 528 aaKnown RBP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 COASYQ13057 564 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 GLRA4Q5JXX5 417 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 TAS1R1Q7RTX1 841 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 HAUS6Q7Z4H7 955 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 CEP120Q8N960 986 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 ZBTB45Q96K62 511 aaPredicted RBP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 CCDC94Q9BW85 323 aaPredicted RBP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 MRPL17Q9NRX2 175 aaKnown RBP18.16■□□□□ 0.5
VAMP4-204ENST00000482519 STK39Q9UEW8 545 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 ZMYM2Q9UBW7 1377 aa18.16■□□□□ 0.5
VAMP4-204ENST00000482519 H0YCG3 227 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 K7ENM7 598 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 SPTLC2O15270 562 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 TADA2AO75478 443 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 F13A1P00488 732 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 PDIA4P13667 645 aaKnown RBP18.15■□□□□ 0.5
VAMP4-204ENST00000482519 STAT6P42226 847 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 TUSC3Q13454 348 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 PKP1Q13835 747 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 SMAD2Q15796 467 aaKnown RBP18.15■□□□□ 0.5
VAMP4-204ENST00000482519 KIAA1841Q6NSI8 718 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 ANKRD54Q6NXT1 300 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 MPZL3Q6UWV2 235 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 GJD3Q8N144 294 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 LINC00301Q8NCQ3 95 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 SMRP1Q8NCR6 262 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 HASPINQ8TF76 798 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 PAAF1Q9BRP4 392 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 STK17AQ9UEE5 414 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 HCFC2Q9Y5Z7 792 aa18.15■□□□□ 0.5
VAMP4-204ENST00000482519 TRAK2O60296 914 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 SOD2P04179 222 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 URODP06132 367 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 MCF2P10911 925 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 KLRC2P26717 231 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 GRM5P41594 1212 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 NCKAP1LP55160 1127 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 HSP90AA2PQ14568 343 aaPredicted RBP18.14■□□□□ 0.49
VAMP4-204ENST00000482519 TMEM184AQ6ZMB5 413 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 SV2BQ7L1I2 683 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 PDILTQ8N807 584 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 CASP10Q92851 521 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 EMILIN2Q9BXX0 1053 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 CD320Q9NPF0 282 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 TOPORSQ9NS56 1045 aaPredicted RBP18.14■□□□□ 0.49
VAMP4-204ENST00000482519 ADAM28Q9UKQ2 775 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
VAMP4-204ENST00000482519 IRAK3Q9Y616 596 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 C5orf42Q9H799 3197 aa18.14■□□□□ 0.49
VAMP4-204ENST00000482519 MUC3AQ02505 3323 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 TOM1L1O75674 476 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 EPCAMP16422 314 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 PROZP22891 400 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 GLUD2P49448 558 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 ZNF131P52739 623 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 KCNC3Q14003 757 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 NOLC1Q14978 699 aaKnown RBP eCLIP18.13■□□□□ 0.49
VAMP4-204ENST00000482519 SEZ6Q53EL9 994 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 ACAP3Q96P50 834 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 HERC2P3Q9BVR0 1158 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 GPR62Q9BZJ7 368 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 TBX20Q9UMR3 447 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms