RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CRYMQ14894 314 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 XXYLT1Q8NBI6 393 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 GGA2Q9UJY4 613 aa13.57□□□□□ -0.24
VPS52-218ENST00000482399 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
VPS52-218ENST00000482399 NUP98P52948 1817 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 MGRN1O60291 552 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 RTN2O75298 545 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 ECE1P42892 770 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
VPS52-218ENST00000482399 MFAP3P55082 362 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 RASA3Q14644 834 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 SLFN11Q7Z7L1 901 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 CSRNP1Q96S65 589 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
VPS52-218ENST00000482399 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 MYH7BA7E2Y1 1941 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
VPS52-218ENST00000482399 GHRP10912 638 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 RALAP11233 206 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 NPEPPSP55786 919 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 ANKRD35Q8N283 1001 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 ETNPPLQ8TBG4 499 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 CCDC17Q96LX7 622 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 RBM15Q96T37 977 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS52-218ENST00000482399 PCDHB18PQ96TA0 734 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 TEKT3Q9BXF9 490 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 WNT8AQ9H1J5 351 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 NPHS2Q9NP85 383 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 NAALADL1Q9UQQ1 740 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 TESPA1A2RU30 521 aaPredicted RBP13.56□□□□□ -0.24
VPS52-218ENST00000482399 KRT10P13645 584 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 PLS3P13797 630 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 CRKP46108 304 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 SOX10P56693 466 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 JAM2P57087 298 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
VPS52-218ENST00000482399 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
VPS52-218ENST00000482399 TIAM2Q8IVF5 1701 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 BTNL10A8MVZ5 291 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 CLGNO14967 610 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 NUDT17P0C025 328 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 PRELPP51888 382 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ANKRD20A2Q5SQ80 823 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ANKRD20A1Q5TYW2 823 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 APBB1IPQ7Z5R6 666 aaPredicted RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 SNF8Q96H20 258 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 FBXO28Q9NVF7 368 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 C5orf60A6NFR6 353 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 SGK1O00141 431 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ZSCAN5DPP0CG00 497 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ALAS1P13196 640 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 PPATQ06203 517 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 P3H1Q32P28 736 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 LACTB2Q53H82 288 aaPredicted RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 PLA2G4FQ68DD2 849 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 DCUN1D2Q6PH85 259 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 ZDHHC14Q8IZN3 488 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 GBP7Q8N8V2 638 aaPredicted RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 C1orf131Q8NDD1 294 aaKnown RBP13.55□□□□□ -0.24
VPS52-218ENST00000482399 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
VPS52-218ENST00000482399 MYH3P11055 1940 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 EIF2AK2P19525 551 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 STAT2P52630 851 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 BIRC2Q13490 618 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 SMAD1Q15797 465 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 CLUL1Q15846 466 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 ACCSQ96QU6 501 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 UBN1Q9NPG3 1134 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 AGTPBP1Q9UPW5 1226 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 GLI3P10071 1580 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 COL4A1P02462 1669 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 RRM1P23921 792 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 POLE2P56282 527 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms