RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 USP41Q3LFD5 358 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 ZNF568Q3ZCX4 644 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 KCNK18Q7Z418 384 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 ZBTB33Q86T24 672 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 KLHL5Q96PQ7 755 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 LRFN3Q9BTN0 628 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 VN1R3Q9BXE9 311 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 LARSQ9P2J5 1176 aaKnown RBP21.86■■□□□ 1.09
MSH5-215ENST00000482280 MUTYHQ9UIF7 546 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 TNFSF13BQ9Y275 285 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 USP20Q9Y2K6 914 aa21.86■■□□□ 1.09
MSH5-215ENST00000482280 BDP1A6H8Y1 2624 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 TTLL13PA6NNM8 815 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 CNPP09543 421 aaKnown RBP21.85■■□□□ 1.09
MSH5-215ENST00000482280 PLS3P13797 630 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 EPCAMP16422 314 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 FUT10Q6P4F1 479 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 INTS4Q96HW7 963 aaKnown RBP21.85■■□□□ 1.09
MSH5-215ENST00000482280 FBXL18Q96ME1 805 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 PNMA5Q96PV4 448 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 SFXN1Q9H9B4 322 aa21.85■■□□□ 1.09
MSH5-215ENST00000482280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.85■■□□□ 1.09
MSH5-215ENST00000482280 CASTOR2A6NHX0 329 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 SFI1A8K8P3 1242 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 PRR33A8MZF0 331 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 LOC730098B7Z3J9 87 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 K7ELQ4 463 aaPredicted RBP21.84■■□□□ 1.09
MSH5-215ENST00000482280 SLC16A4O15374 487 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 TXLNAP40222 546 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 NT5DC1Q5TFE4 455 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 EEF1DP3Q658K8 133 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 GSTCDQ8NEC7 633 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 SLC22A17Q8WUG5 538 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 ARHGAP28Q9P2N2 729 aa21.84■■□□□ 1.09
MSH5-215ENST00000482280 GLUD1P00367 558 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 HSP90AA1P07900 732 aaKnown RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 SP100P23497 879 aaPredicted RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 MATR3P43243 847 aaKnown RBP eCLIP21.83■■□□□ 1.09
MSH5-215ENST00000482280 DSG1Q02413 1049 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 ELAVL2Q12926 359 aaKnown RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 DHX8Q14562 1220 aaKnown RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 TMEM119Q4V9L6 283 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 HERC4Q5GLZ8 1057 aaPredicted RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 DAW1Q8N136 415 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 SPIRE2Q8WWL2 714 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 BICD1Q96G01 975 aa21.83■■□□□ 1.09
MSH5-215ENST00000482280 ACO2Q99798 780 aaKnown RBP21.83■■□□□ 1.09
MSH5-215ENST00000482280 SYT1P21579 422 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 CLCN4P51793 760 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 SLC12A3P55017 1021 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 TMC5Q6UXY8 1006 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 TAS1R1Q7RTX1 841 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 GPBP1Q86WP2 473 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 C12orf76Q8N812 135 aaPredicted RBP21.82■■□□□ 1.08
MSH5-215ENST00000482280 RIN2Q8WYP3 895 aaPredicted RBP21.82■■□□□ 1.08
MSH5-215ENST00000482280 RABGGTAQ92696 567 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 TARS2Q9BW92 718 aaKnown RBP21.82■■□□□ 1.08
MSH5-215ENST00000482280 ZHX3Q9H4I2 956 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 SLC38A7Q9NVC3 462 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 ODF2LQ9ULJ1 636 aa21.82■■□□□ 1.08
MSH5-215ENST00000482280 TEX28O15482 410 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 TBCAO75347 108 aaKnown RBP21.81■■□□□ 1.08
MSH5-215ENST00000482280 FAM13AO94988 1023 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 EDN1P05305 212 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 MCF2P10911 925 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 HARSP12081 509 aaKnown RBP21.81■■□□□ 1.08
MSH5-215ENST00000482280 SCP2P22307 547 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 GRM5P41594 1212 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 OSTNP61366 133 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 MAPK7Q13164 816 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 PDXDC1Q6P996 788 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 MPZL3Q6UWV2 235 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 CEP57Q86XR8 500 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 GPR65Q8IYL9 337 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 HASPINQ8TF76 798 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 UROC1Q96N76 676 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 ACAP3Q96P50 834 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 NTPCRQ9BSD7 190 aaKnown RBP21.81■■□□□ 1.08
MSH5-215ENST00000482280 ANKFY1Q9P2R3 1169 aa21.81■■□□□ 1.08
MSH5-215ENST00000482280 TDRD15B5MCY1 1934 aaKnown RBP21.8■■□□□ 1.08
MSH5-215ENST00000482280 F8W810 466 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 PTGESO14684 152 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 TRAPPC3O43617 180 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 LILRB3O75022 631 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 KARSQ15046 597 aaKnown RBP21.8■■□□□ 1.08
MSH5-215ENST00000482280 GLRA4Q5JXX5 417 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 KIAA0319Q5VV43 1072 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 TDRD5Q8NAT2 981 aaKnown RBP21.8■■□□□ 1.08
MSH5-215ENST00000482280 GPR62Q9BZJ7 368 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 CDT1Q9H211 546 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 ZSCAN16Q9H4T2 348 aaPredicted RBP21.8■■□□□ 1.08
MSH5-215ENST00000482280 POMKQ9H5K3 350 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 MAN1C1Q9NR34 630 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 CHST7Q9NS84 486 aa21.8■■□□□ 1.08
MSH5-215ENST00000482280 TOM1L1O75674 476 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 KIF4AO95239 1232 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 WEE2P0C1S8 567 aa21.79■■□□□ 1.08
MSH5-215ENST00000482280 PLCG1P19174 1290 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms