RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MANSC1Q9H8J5 431 aa7.35□□□□□ -1.23
SF3B1-210ENST00000482158 PRDM11Q9NQV5 511 aa7.35□□□□□ -1.23
SF3B1-210ENST00000482158 LANCL2Q9NS86 450 aa7.35□□□□□ -1.23
SF3B1-210ENST00000482158 TDP1Q9NUW8 608 aa7.35□□□□□ -1.23
SF3B1-210ENST00000482158 NCDNQ9UBB6 729 aa7.35□□□□□ -1.23
SF3B1-210ENST00000482158 AJAP1Q9UKB5 411 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-210ENST00000482158 MYBBP1AQ9BQG0 1328 aaKnown RBP7.34□□□□□ -1.23
SF3B1-210ENST00000482158 SASH1O94885 1247 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 ALOX15P16050 662 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-210ENST00000482158 CNR2P34972 360 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 MRPL49Q13405 166 aaKnown RBP7.34□□□□□ -1.23
SF3B1-210ENST00000482158 PPP4R3AQ6IN85 833 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 LRRC37BQ96QE4 947 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 UHRF1Q96T88 793 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-210ENST00000482158 C12orf65Q9H3J6 166 aaKnown RBP7.34□□□□□ -1.23
SF3B1-210ENST00000482158 SLC52A1Q9NWF4 448 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 PPP4R1LQ9P1A2 415 aa7.34□□□□□ -1.23
SF3B1-210ENST00000482158 FRMPD2Q68DX3 1309 aaPredicted RBP7.33□□□□□ -1.24
SF3B1-210ENST00000482158 LAMTOR5O43504 91 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 B3GALT2O43825 422 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CDC14BO60729 498 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 PTPN7P35236 360 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 TLE1Q04724 770 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 SURF1Q15526 300 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 SLFN13Q68D06 897 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 TAX1BP1Q86VP1 789 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CAMKK1Q8N5S9 505 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 DCBLD1Q8N8Z6 715 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 PLBD2Q8NHP8 589 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CASKIN2Q8WXE0 1202 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 RGMAQ96B86 450 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 TMX3Q96JJ7 454 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CCDC136Q96JN2 1154 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 GNRHR2Q96P88 292 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CDC5LQ99459 802 aaKnown RBP7.33□□□□□ -1.24
SF3B1-210ENST00000482158 ACTL7AQ9Y615 435 aa7.33□□□□□ -1.24
SF3B1-210ENST00000482158 CCDC194A0A1B0GVG4 234 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 GPR32O75388 356 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 FTLP02792 175 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 DDCP20711 480 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 HTR1BP28222 390 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 GZMKP49863 264 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 HK3P52790 923 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 NPEPPSP55786 919 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 ZNF280AP59817 542 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 APBA1Q02410 837 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 NOGQ13253 232 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 SP140Q13342 867 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 HLTFQ14527 1009 aaKnown RBP eCLIP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 FAM214AQ32MH5 1076 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 TBC1D10BQ4KMP7 808 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 KHDC1Q4VXA5 237 aaKnown RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 COL23A1Q86Y22 540 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 IL17RAQ96F46 866 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 VRK1Q99986 396 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 SENP6Q9GZR1 1112 aaPredicted RBP7.32□□□□□ -1.24
SF3B1-210ENST00000482158 TMEM60Q9H2L4 133 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 ARNT2Q9HBZ2 717 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 MSL2Q9HCI7 577 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 NR2E3Q9Y5X4 410 aa7.32□□□□□ -1.24
SF3B1-210ENST00000482158 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 SLC16A6O15403 523 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 HOXA3O43365 443 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-210ENST00000482158 CAND2O75155 1236 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 ALDH1A3P47895 512 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 AGFG1P52594 562 aaKnown RBP7.31□□□□□ -1.24
SF3B1-210ENST00000482158 SNAPC2Q13487 334 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 LLGL1Q15334 1064 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 ZFYVE27Q5T4F4 411 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 AFMIDQ63HM1 303 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 SLC4A10Q6U841 1118 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 RSPH3Q86UC2 560 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 KIAA0319LQ8IZA0 1049 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 C3orf20Q8ND61 904 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 BORCS6Q96GS4 357 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 TCF25Q9BQ70 676 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-210ENST00000482158 ADAM7Q9H2U9 754 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 NELFAQ9H3P2 528 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 DDX21Q9NR30 783 aaKnown RBP eCLIP7.31□□□□□ -1.24
SF3B1-210ENST00000482158 CALCOCO1Q9P1Z2 691 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 SLC23A1Q9UHI7 598 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 PCDHA3Q9Y5H8 950 aa7.31□□□□□ -1.24
SF3B1-210ENST00000482158 PRICKLE3O43900 615 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-210ENST00000482158 RPLP2P05387 115 aaKnown RBP7.3□□□□□ -1.24
SF3B1-210ENST00000482158 IL2RBP14784 551 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 FLT3LGP49771 235 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 CTXN1P60606 82 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 NKX6-1P78426 367 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-210ENST00000482158 RAB39AQ14964 217 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 CSRP2Q16527 193 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 ANKS6Q68DC2 871 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 CCSAPQ6IQ19 270 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-210ENST00000482158 FAM111BQ6SJ93 734 aa7.3□□□□□ -1.24
SF3B1-210ENST00000482158 NPNTQ6UXI9 565 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms