RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 EXOC8Q8IYI6 725 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 ING5Q8WYH8 240 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 TCEANC2Q96MN5 208 aa16.68■□□□□ 0.26
HDAC6-224ENST00000481929 NDRG2Q9UN36 371 aaKnown RBP16.68■□□□□ 0.26
HDAC6-224ENST00000481929 CCDC196A0A1B0GTZ2 297 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 MAN2B1O00754 1011 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 EDIL3O43854 480 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 POU2F2P09086 479 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 PMLP29590 882 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
HDAC6-224ENST00000481929 CCR3P51677 355 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 RCAN1P53805 252 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 NPEPPSP55786 919 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 SIM2Q14190 667 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-224ENST00000481929 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC6-224ENST00000481929 PSMD5Q16401 504 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 IL31Q6EBC2 164 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 B3GNT9Q6UX72 402 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-224ENST00000481929 RNF149Q8NC42 400 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 CCDC148Q8NFR7 591 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 RABGGTAQ92696 567 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 DNASE1L2Q92874 299 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 CLSTN3Q9BQT9 956 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 TTPALQ9BTX7 342 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 TRIM6Q9C030 488 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-224ENST00000481929 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
HDAC6-224ENST00000481929 ASAP2O43150 1006 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 GDF9O60383 454 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 TSPAN1O60635 241 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 RFC5P40937 340 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 GRIK3Q13003 919 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-224ENST00000481929 Q4G0T1 1027 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 CEP57Q86XR8 500 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
HDAC6-224ENST00000481929 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-224ENST00000481929 HCFC1R1Q9NWW0 138 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
HDAC6-224ENST00000481929 PPME1Q9Y570 386 aa16.66■□□□□ 0.26
HDAC6-224ENST00000481929 SHISA7A6NL88 538 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 DKC1O60832 514 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 SHC2P98077 582 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 TCP11Q8WWU5 503 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 MCRS1Q96EZ8 462 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 PLA2G2FQ9BZM2 168 aa16.65■□□□□ 0.26
HDAC6-224ENST00000481929 NXF3Q9H4D5 531 aaKnown RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 DNMT3BQ9UBC3 853 aaKnown RBP16.65■□□□□ 0.26
HDAC6-224ENST00000481929 ZFYVE26Q68DK2 2539 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 RALGAPA1Q6GYQ0 2036 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 AKAP5P24588 427 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 QARSP47897 775 aaKnown RBP16.64■□□□□ 0.25
HDAC6-224ENST00000481929 AKAP17AQ02040 695 aaKnown RBP16.64■□□□□ 0.25
HDAC6-224ENST00000481929 UVSSAQ2YD98 709 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 FAM171A1Q5VUB5 890 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 PDXDC1Q6P996 788 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ZNF687Q8N1G0 1237 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
HDAC6-224ENST00000481929 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 TBCKQ8TEA7 893 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 HASPINQ8TF76 798 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ELSPBP1Q96BH3 223 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 BRD9Q9H8M2 597 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ANKRD11Q6UB99 2663 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-224ENST00000481929 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.25
HDAC6-224ENST00000481929 FASNP49327 2511 aaKnown RBP16.63■□□□□ 0.25
HDAC6-224ENST00000481929 INO80B-WBP1J3KQ70 363 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 PRPF3O43395 683 aaKnown RBP16.63■□□□□ 0.25
HDAC6-224ENST00000481929 TDP2O95551 362 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 CXCL12P48061 93 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 EMC2Q15006 297 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 AASDHQ4L235 1098 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-224ENST00000481929 TANGO2Q6ICL3 276 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 LMAN1LQ9HAT1 526 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 KLK14Q9P0G3 267 aa16.63■□□□□ 0.25
HDAC6-224ENST00000481929 NOTCH4Q99466 2003 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 ADAM12O43184 909 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 KIF4AO95239 1232 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 PROS1P07225 676 aa16.62■□□□□ 0.25
HDAC6-224ENST00000481929 RHOP08100 348 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms