RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CDH22Q9UJ99 828 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 TPCN1Q9ULQ1 816 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 LZTS1Q9Y250 596 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
HLA-B-253ENST00000481849 TTC3P53804 2025 aa10.07□□□□□ -0.8
HLA-B-253ENST00000481849 FRYQ5TBA9 3013 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 IGKV6-21A0A0C4DH24 114 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 CDC14CA4D256 554 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 MEIS3P2A8K0S8 358 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 LOC730098B7Z3J9 87 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 ERVH48-1M5A8F1 160 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.84e-6■■□□□ 13.4
HLA-B-253ENST00000481849 EOMESO95936 686 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 SRGAP2CP0DJJ0 459 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 SRGAP2BP0DMP2 458 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 PHKA2P46019 1235 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 ALDH7A1P49419 539 aaKnown RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 SMC1AQ14683 1233 aaKnown RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 EARS2Q5JPH6 523 aaKnown RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 NCAPH2Q6IBW4 605 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 SYCE2Q6PIF2 218 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM173Q86WV6 379 aaPredicted RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 VWA5B2Q8N398 1253 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 NECAB1Q8N987 351 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 AUTS2Q8WXX7 1259 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 PHF7Q9BWX1 381 aaPredicted RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 GBP3Q9H0R5 595 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 NGRNQ9NPE2 291 aaKnown RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 CYP26B1Q9NR63 512 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 CHST12Q9NRB3 414 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 WRAP73Q9P2S5 460 aaPredicted RBP10.06□□□□□ -0.8
HLA-B-253ENST00000481849 VAV3Q9UKW4 847 aa10.06□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM221A6NGB7 291 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 C2orf71A6NGG8 1288 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 M0R296 226 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 EPB41L2O43491 1005 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 PFKFB2O60825 505 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CTDNEP1O95476 244 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CXCL14O95715 111 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 NEFLP07196 543 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 WEE2P0C1S8 567 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 XBP1P17861 261 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 QARSP47897 775 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 AK2P54819 239 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CDC42EP1Q00587 391 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 RNASELQ05823 741 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 PPP2R5CQ13362 524 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CTTNQ14247 550 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 CBX2Q14781 532 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 GLB1LQ6UWU2 654 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM87AQ8NBN3 555 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 PRPF31Q8WWY3 499 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 SUSD6Q92537 303 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 EDAQ92838 391 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 HAS1Q92839 578 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 DYDC2Q96IM9 177 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 LXNQ9BS40 222 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 MRPL9Q9BYD2 267 aaKnown RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 KCNMB3Q9NPA1 279 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 FAM105AQ9NUU6 356 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
HLA-B-253ENST00000481849 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
HLA-B-253ENST00000481849 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 MYO18BQ8IUG5 2567 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ZBTB39O15060 712 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ADH1AP07327 375 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 YWHABP31946 246 aaKnown RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ZXDAP98168 799 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 EPHA7Q15375 998 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 XKR9Q5GH70 373 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 NOMO2Q5JPE7 1267 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 KANK3Q6NY19 840 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM184AQ6ZMB5 413 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 C12orf76Q8N812 135 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 RNF217Q8TC41 542 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 BCL7CQ8WUZ0 217 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 CASP10Q92851 521 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 JPH2Q9BR39 696 aaPredicted RBP10.04□□□□□ -0.8
HLA-B-253ENST00000481849 INO80BQ9C086 356 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms