RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 MYBP10242 640 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 CA8P35219 290 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 DDIT3P35638 169 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 PPM1AP35813 382 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZNF131P52739 623 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZC2HC1CQ53FD0 456 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 SLC39A4Q6P5W5 647 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 MYCT1Q8N699 235 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 MRPL43Q8N983 215 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 HPS3Q969F9 1004 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 TMEM169Q96HH4 297 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 GPR62Q9BZJ7 368 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 TBC1D7Q9P0N9 293 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 ANKFY1Q9P2R3 1169 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 TNFSF13BQ9Y275 285 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
RAPGEF1-207ENST00000481260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 C2CD2LO14523 706 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 LILRB3O75022 631 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 WEE2P0C1S8 567 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 CTSAP10619 480 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 EPCAMP16422 314 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 CASP1P29466 404 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 NDUFV1P49821 464 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 KRT17Q04695 432 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 SPAG1Q07617 926 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 KCNA1Q09470 495 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZNF568Q3ZCX4 644 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 CD300LGQ6UXG3 332 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 SFR1Q86XK3 245 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 DNAJC19Q96DA6 116 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-207ENST00000481260 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 I3L4J1 428 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 K7ENM7 598 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 MBTPS2O43462 519 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 SLC26A4O43511 780 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 FAM13AO94988 1023 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 KIF4AO95239 1232 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 BRD1O95696 1058 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 ALDH2P05091 517 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 KRT18P05783 430 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 TNFSF9P41273 254 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 CASP5P51878 434 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 E2F4Q16254 413 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 DCAF4L1Q3SXM0 396 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 MPZL3Q6UWV2 235 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 RNF168Q8IYW5 571 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 C3orf58Q8NDZ4 430 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 DDX12PQ92771 950 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 TIPINQ9BVW5 301 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 UBN1Q9NPG3 1134 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 KANSL3Q9P2N6 904 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 PUF60Q9UHX1 559 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 CD207Q9UJ71 328 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 PCDHA7Q9UN72 937 aa12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 MORC2Q9Y6X9 1032 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-207ENST00000481260 FAM189A1O60320 539 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 PPP6R2O75170 966 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 YEATS4O95619 227 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 CNPP09543 421 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 RPL17P18621 184 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 GRM5P41594 1212 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 STAT6P42226 847 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 GRIK3Q13003 919 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 AAK1Q2M2I8 961 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 SLC10A6Q3KNW5 377 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 ALKAL1Q6UXT8 129 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 GRAMD1CQ8IYS0 662 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 SLC22A17Q8WUG5 538 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 DHX58Q96C10 678 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 SNX27Q96L92 541 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 RPS6KC1Q96S38 1066 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms