RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 FAM50BQ9Y247 325 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 GRXCR2A6NFK2 248 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 C2orf71A6NGG8 1288 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 K7ENM7 598 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 GLP2RO95838 553 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 SRGAP2BP0DMP2 458 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 CTSAP10619 480 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 NCKAP1LP55160 1127 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 RBM10P98175 930 aaKnown RBP22.1■■□□□ 1.13
VPS36-204ENST00000480923 LLGL2Q6P1M3 1020 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 MPZL3Q6UWV2 235 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 CCDC73Q6ZRK6 1079 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 HAUS6Q7Z4H7 955 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 CCDC94Q9BW85 323 aaPredicted RBP22.1■■□□□ 1.13
VPS36-204ENST00000480923 COLEC11Q9BWP8 271 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 VN1R3Q9BXE9 311 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 PTPRHQ9HD43 1115 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 CLEC1BQ9P126 229 aa22.1■■□□□ 1.13
VPS36-204ENST00000480923 TNFRSF10AO00220 468 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 PPP6R2O75170 966 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 THP07101 528 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 HARSP12081 509 aaKnown RBP22.09■■□□□ 1.13
VPS36-204ENST00000480923 STAT6P42226 847 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 ZNF131P52739 623 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 YARSP54577 528 aaKnown RBP22.09■■□□□ 1.13
VPS36-204ENST00000480923 OSTNP61366 133 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 TUSC3Q13454 348 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 BECN1Q14457 450 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 SV2BQ7L1I2 683 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 DYMQ7RTS9 669 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 CEP120Q8N960 986 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 VN1R2Q8NFZ6 395 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 BICD1Q96G01 975 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 ANKFY1Q9P2R3 1169 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 VCANP13611 3396 aa22.09■■□□□ 1.13
VPS36-204ENST00000480923 SPTBN5Q9NRC6 3674 aaKnown RBP22.08■■□□□ 1.13
VPS36-204ENST00000480923 F8W810 466 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 PTGESO14684 152 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 TRAK2O60296 914 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 MCF2P10911 925 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 GRM5P41594 1212 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 MATR3P43243 847 aaKnown RBP eCLIP22.08■■□□□ 1.13
VPS36-204ENST00000480923 SMAD4Q13485 552 aaKnown RBP22.08■■□□□ 1.13
VPS36-204ENST00000480923 PDILTQ8N807 584 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 RABGGTAQ92696 567 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 ZBTB45Q96K62 511 aaPredicted RBP22.08■■□□□ 1.13
VPS36-204ENST00000480923 MSLNLQ96KJ4 702 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 CXCL16Q9H2A7 254 aa22.08■■□□□ 1.13
VPS36-204ENST00000480923 CASTOR2A6NHX0 329 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 MBTPS2O43462 519 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 CLASP2O75122 1294 aaKnown RBP22.07■■□□□ 1.12
VPS36-204ENST00000480923 TOM1L1O75674 476 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 SOD2P04179 222 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 PROZP22891 400 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 PTPN14Q15678 1187 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 ZPBP2Q6X784 338 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 FAM178BQ8IXR5 827 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 HERC2P3Q9BVR0 1158 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 TOPORSQ9NS56 1045 aaPredicted RBP22.07■■□□□ 1.12
VPS36-204ENST00000480923 CACNG4Q9UBN1 327 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 IRAK3Q9Y616 596 aa22.07■■□□□ 1.12
VPS36-204ENST00000480923 A0A087X0B3 334 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 ABLIM1O14639 778 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 CUTAO60888 179 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 URODP06132 367 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 SCP2P22307 547 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 COASYQ13057 564 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 NOLC1Q14978 699 aaKnown RBP eCLIP22.06■■□□□ 1.12
VPS36-204ENST00000480923 GLRA4Q5JXX5 417 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 ATL3Q6DD88 541 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 KCNG4Q8TDN1 519 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 DDX12PQ92771 950 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 ACAP3Q96P50 834 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 MRPL17Q9NRX2 175 aaKnown RBP22.06■■□□□ 1.12
VPS36-204ENST00000480923 TBX20Q9UMR3 447 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 HCFC2Q9Y5Z7 792 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 BRWD1Q9NSI6 2320 aa22.06■■□□□ 1.12
VPS36-204ENST00000480923 TCF20Q9UGU0 1960 aaKnown RBP22.05■■□□□ 1.12
VPS36-204ENST00000480923 MYMKA6NI61 221 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 C2CD2LO14523 706 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 CLDN3O15551 220 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 TADA2AO75478 443 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 BRD1O95696 1058 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 NMT1P30419 496 aaKnown RBP22.05■■□□□ 1.12
VPS36-204ENST00000480923 LIG4P49917 911 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 KCNC3Q14003 757 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 HSP90AA2PQ14568 343 aaPredicted RBP22.05■■□□□ 1.12
VPS36-204ENST00000480923 TAS1R1Q7RTX1 841 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 CASP10Q92851 521 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 PAAF1Q9BRP4 392 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 EMILIN2Q9BXX0 1053 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 ADAM28Q9UKQ2 775 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 CFAP45Q9UL16 551 aa22.05■■□□□ 1.12
VPS36-204ENST00000480923 HNRNPDLO14979 420 aaKnown RBP22.04■■□□□ 1.12
VPS36-204ENST00000480923 ME1P48163 572 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 GLUD2P49448 558 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 DNM1Q05193 864 aaKnown RBP22.04■■□□□ 1.12
VPS36-204ENST00000480923 NAB2Q15742 525 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 SMAD2Q15796 467 aaKnown RBP22.04■■□□□ 1.12
VPS36-204ENST00000480923 KIAA1841Q6NSI8 718 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms