RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 CDR2LQ86X02 465 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 EIF2AQ9BY44 585 aaKnown RBP18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
SCAMP3-207ENST00000480219 KRT13P13646 458 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 PBX1P40424 430 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 ACOT2P49753 483 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 VAMP7P51809 220 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 ZNF75DP51815 510 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 SURF1Q15526 300 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 USP37Q86T82 979 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 CEP120Q8N960 986 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 APBB2Q92870 758 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 IFIH1Q9BYX4 1025 aaKnown RBP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 NDST4Q9H3R1 872 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 TAB2Q9NYJ8 693 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 RBAKQ9NYW8 714 aaPredicted RBP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 RALGAPA2Q2PPJ7 1873 aa18.31■□□□□ 0.52
SCAMP3-207ENST00000480219 ALPK3Q96L96 1907 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 TTC26A0AVF1 554 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 GTPBP10A4D1E9 387 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 MGEA5O60502 916 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 NPTXRO95502 500 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 TIMP1P01033 207 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 STAG3L1P0CL83 205 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 CDC25BP30305 580 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 GTF2H1P32780 548 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 TNFSF9P41273 254 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 MATR3P43243 847 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 RAB27AP51159 221 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 KCNH2Q12809 1159 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 FILIP1LQ4L180 1135 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 XKR4Q5GH76 650 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 COL13A1Q5TAT6 717 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 RDH13Q8NBN7 331 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 SMG8Q8ND04 991 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 VWCEQ96DN2 955 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 ABHD8Q96I13 439 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 VPS16Q9H269 839 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 ASB7Q9H672 318 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
SCAMP3-207ENST00000480219 A0A0U1RQF3 1178 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 A0A1W2PQC6 194 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TRIM43BA6NCK2 446 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 LRRIQ3A6PVS8 624 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 P4HA2O15460 535 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 IL18RAPO95256 599 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TPM3P06753 285 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TPM2P07951 284 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 ZSCAN20P17040 1043 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 WNT7BP56706 349 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 FAM189BP81408 668 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 SLC10A6Q3KNW5 377 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TWF2Q6IBS0 349 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 ALKAL1Q6UXT8 129 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 CD302Q8IX05 232 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TMEM192Q8IY95 271 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 THNSL1Q8IYQ7 743 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TRIM43Q96BQ3 446 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 ERGIC2Q96RQ1 377 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TSPAN18Q96SJ8 248 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TRIM5Q9C035 493 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 TSPYL2Q9H2G4 693 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 FAM105AQ9NUU6 356 aa18.29■□□□□ 0.52
SCAMP3-207ENST00000480219 STX10O60499 249 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 ADCY5O95622 1261 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 HARSP12081 509 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 SKIP12755 728 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 CYP2C18P33260 490 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 AP3M2P53677 418 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 DLG4P78352 724 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 SEZ6Q53EL9 994 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 NT5DC4Q86YG4 428 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 LINC01599Q8WXQ3 324 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 ACAP3Q96P50 834 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 CGRRF1Q99675 332 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 RPF1Q9H9Y2 349 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 COQ4Q9Y3A0 265 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 IPPQ9Y573 584 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 PCDHB2Q9Y5E7 798 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 ANK1P16157 1881 aa18.28■□□□□ 0.52
SCAMP3-207ENST00000480219 C9IYK1 514 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 INPPL1O15357 1258 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 TEX33O43247 280 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 N4BP1O75113 896 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 FMO5P49326 533 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms