RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 ABLIM1O14639 778 aa9□□□□□ -0.97
USP54-212ENST00000480210 MAPK13O15264 365 aa9□□□□□ -0.97
USP54-212ENST00000480210 TLL1O43897 1013 aa9□□□□□ -0.97
USP54-212ENST00000480210 EXTL3O43909 919 aa9□□□□□ -0.97
USP54-212ENST00000480210 OFD1O75665 1012 aa9□□□□□ -0.97
USP54-212ENST00000480210 UPP2O95045 317 aa9□□□□□ -0.97
USP54-212ENST00000480210 FGFR1OPO95684 399 aaKnown RBP9□□□□□ -0.97
USP54-212ENST00000480210 ADRB2P07550 413 aa9□□□□□ -0.97
USP54-212ENST00000480210 PAX3P23760 479 aa9□□□□□ -0.97
USP54-212ENST00000480210 CCNE1P24864 410 aa9□□□□□ -0.97
USP54-212ENST00000480210 MSNP26038 577 aaKnown RBP9□□□□□ -0.97
USP54-212ENST00000480210 CASP5P51878 434 aa9□□□□□ -0.97
USP54-212ENST00000480210 NLRP12P59046 1061 aa9□□□□□ -0.97
USP54-212ENST00000480210 DEFB103AP81534 67 aa9□□□□□ -0.97
USP54-212ENST00000480210 LRRC63Q05C16 580 aa9□□□□□ -0.97
USP54-212ENST00000480210 CAMK4Q16566 473 aa9□□□□□ -0.97
USP54-212ENST00000480210 TCTN1Q2MV58 587 aa9□□□□□ -0.97
USP54-212ENST00000480210 EDRF1Q3B7T1 1238 aa9□□□□□ -0.97
USP54-212ENST00000480210 EEF1DP3Q658K8 133 aa9□□□□□ -0.97
USP54-212ENST00000480210 CENPPQ6IPU0 288 aa9□□□□□ -0.97
USP54-212ENST00000480210 GPR153Q6NV75 609 aa9□□□□□ -0.97
USP54-212ENST00000480210 SASS6Q6UVJ0 657 aa9□□□□□ -0.97
USP54-212ENST00000480210 USP37Q86T82 979 aa9□□□□□ -0.97
USP54-212ENST00000480210 ADSSL1Q8N142 457 aa9□□□□□ -0.97
USP54-212ENST00000480210 GPD1LQ8N335 351 aa9□□□□□ -0.97
USP54-212ENST00000480210 XXYLT1Q8NBI6 393 aa9□□□□□ -0.97
USP54-212ENST00000480210 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
USP54-212ENST00000480210 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
USP54-212ENST00000480210 FAM193BQ96PV7 902 aaPredicted RBP9□□□□□ -0.97
USP54-212ENST00000480210 RPS6KC1Q96S38 1066 aa9□□□□□ -0.97
USP54-212ENST00000480210 YME1L1Q96TA2 773 aa9□□□□□ -0.97
USP54-212ENST00000480210 MSTO1Q9BUK6 570 aa9□□□□□ -0.97
USP54-212ENST00000480210 EIF2AQ9BY44 585 aaKnown RBP9□□□□□ -0.97
USP54-212ENST00000480210 KCTD10Q9H3F6 313 aa9□□□□□ -0.97
USP54-212ENST00000480210 ASB7Q9H672 318 aa9□□□□□ -0.97
USP54-212ENST00000480210 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
USP54-212ENST00000480210 PARP2Q9UGN5 583 aa9□□□□□ -0.97
USP54-212ENST00000480210 COLQQ9Y215 455 aaPredicted RBP9□□□□□ -0.97
USP54-212ENST00000480210 DERAQ9Y315 318 aa9□□□□□ -0.97
USP54-212ENST00000480210 TNRC18O15417 2968 aaPredicted RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 ZNF233A6NK53 670 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ANKRD63C9JTQ0 380 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 DYNC1I1O14576 645 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 TGFB1I1O43294 461 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 IL18RAPO95256 599 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 EDN1P05305 212 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 RB1P06400 928 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 THP07101 528 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ATF7P17544 494 aaPredicted RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 PRCPP42785 496 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 FKBP3Q00688 224 aaKnown RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 BTG3Q14201 252 aaPredicted RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 XKR4Q5GH76 650 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 NOMO2Q5JPE7 1267 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ALKAL1Q6UXT8 129 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 AGMOQ6ZNB7 445 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 NELFCDQ8IXH7 590 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 THNSL1Q8IYQ7 743 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 LRRC43Q8N309 656 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 FIBCD1Q8N539 461 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 CACTINQ8WUQ7 758 aaKnown RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 HPS3Q969F9 1004 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ZBTB45Q96K62 511 aaPredicted RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 FBXL18Q96ME1 805 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 CASD1Q96PB1 797 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 TMEM175Q9BSA9 504 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 MKNK1Q9BUB5 465 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 PLVAPQ9BX97 442 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 RC3H2Q9HBD1 1191 aaKnown RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 AGPAT3Q9NRZ7 376 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ANO10Q9NW15 660 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 DMAC2Q9NW81 257 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 SNTG2Q9NY99 539 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 ANKFY1Q9P2R3 1169 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 CPSF3Q9UKF6 684 aaKnown RBP8.99□□□□□ -0.97
USP54-212ENST00000480210 FRMD4BQ9Y2L6 1034 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 GDAQ9Y2T3 454 aa8.99□□□□□ -0.97
USP54-212ENST00000480210 TBKBP1A7MCY6 615 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 CETN3O15182 167 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 CAVIN2O95810 425 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 ALDH2P05091 517 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 KCNE1P15382 129 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 LAG3P18627 525 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 CYP3A5P20815 502 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
USP54-212ENST00000480210 ADSSP30520 456 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 HOXD13P35453 343 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 AP3M2P53677 418 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 RBM10P98175 930 aaKnown RBP8.98□□□□□ -0.97
USP54-212ENST00000480210 PPP2R3AQ06190 1150 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 PDE4CQ08493 712 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 KCNA1Q09470 495 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 GRIK3Q13003 919 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 ADAM9Q13443 819 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 SLC39A4Q6P5W5 647 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 ZSCAN30Q86W11 494 aa8.98□□□□□ -0.97
USP54-212ENST00000480210 CDR2LQ86X02 465 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms