RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 FAM161BQ96MY7 647 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 FAM213AQ9BRX8 229 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 TLE6Q9H808 572 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 C17orf75Q9HAS0 396 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 TRPC7Q9HCX4 862 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 HDAC6Q9UBN7 1215 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 ODF2LQ9ULJ1 636 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 UBQLN1Q9UMX0 589 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 DAAM1Q9Y4D1 1078 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 GSTTP1A0A1W2PQM5 241 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA8IPA6NC78 632 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA8JA6NMD2 632 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 USP27XA6NNY8 438 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 EIF3CLB5ME19 914 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 E9PMD0 336 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 HIP1RO75146 1068 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 THP07101 528 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 MUTP22033 750 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CASP1P29466 404 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 AXLP30530 894 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 MFAP3P55082 362 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 PSMC6P62333 389 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 TMEM132DQ14C87 1099 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 MAPRE1Q15691 268 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 SV2CQ496J9 727 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 COBLL1Q53SF7 1204 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CST9Q5W186 159 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 ZNF467Q7Z7K2 595 aaPredicted RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CCDC50Q8IVM0 306 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 ZNF384Q8TF68 577 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 HEXIM2Q96MH2 286 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 ERGIC2Q96RQ1 377 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 EIF3CQ99613 913 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 DDX50Q9BQ39 737 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 SH2D3AQ9BRG2 576 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 IFT122Q9HBG6 1241 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 RBAKQ9NYW8 714 aaPredicted RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 PLIN4Q96Q06 1357 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 GOLGA6L10A6NI86 522 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 SOWAHDA6NJG2 315 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 A8MXQ7 604 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CYTH3O43739 400 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 LAG3P18627 525 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 PNPLA4P41247 253 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 PDE6CP51160 858 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 DNA2P51530 1060 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 RBP5P82980 135 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 KLHL30Q0D2K2 578 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 EARS2Q5JPH6 523 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 SCARA5Q6ZMJ2 495 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 GSDMBQ8TAX9 411 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 COPS5Q92905 334 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 SLITRK1Q96PX8 696 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 C11orf84Q9BUA3 381 aaPredicted RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 MRPL17Q9NRX2 175 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 BAZ2BQ9UIF8 2168 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 MOCS3O95396 460 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 STAT1P42224 750 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CACNB2Q08289 660 aaPredicted RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 SFSWAPQ12872 951 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 PPP2R5DQ14738 602 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 BTNL9Q6UXG8 535 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 INTS8Q75QN2 995 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 SH3BP5LQ7L8J4 393 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 SLC35F6Q8N357 371 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 PPTC7Q8NI37 304 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 CCDC26Q8TAB7 109 aa6.39□□□□□ -1.39
CPS1-207ENST00000479988 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 FAM207AQ9NSI2 230 aaPredicted RBP6.39□□□□□ -1.39
CPS1-207ENST00000479988 IGSF9BQ9UPX0 1349 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 A6NNZ2 444 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CLIC2O15247 247 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 RNF8O76064 485 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ADH1AP07327 375 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CLTAP09496 248 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 HSPA8P11142 646 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 ODC1P11926 461 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CD58P19256 250 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 VAV2P52735 878 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 EPHB3P54753 998 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 NPEPPSP55786 919 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 CDK17Q00537 523 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 PTPN11Q06124 597 aaPredicted RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 CCL14Q16627 93 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 EDRF1Q3B7T1 1238 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 TUBB8Q3ZCM7 444 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 ITIH5Q86UX2 942 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 SFR1Q86XK3 245 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 REXO1L1PQ8IX06 675 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 RSAD1Q9HA92 442 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 THG1LQ9NWX6 298 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 STK39Q9UEW8 545 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 DBR1Q9UK59 544 aaKnown RBP6.38□□□□□ -1.39
CPS1-207ENST00000479988 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
CPS1-207ENST00000479988 JRKLQ9Y4A0 524 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms