RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PSRC1Q6PGN9 363 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 DEFB128Q7Z7B8 93 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZNF598Q86UK7 904 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 LUZP1Q86V48 1076 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 IRF2BP1Q8IU81 584 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 CEP120Q8N960 986 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 RSPH1Q8WYR4 309 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 DPF3Q92784 378 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 BADQ92934 168 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 SAAL1Q96ER3 474 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 METTL14Q9HCE5 456 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 TDRD15B5MCY1 1934 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZNF233A6NK53 670 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 INPPL1O15357 1258 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 EOMESO95936 686 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 ACTN1P12814 892 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 IKBKEQ14164 716 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZBTB41Q5SVQ8 909 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CBWD2Q8IUF1 395 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CD302Q8IX05 232 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 FAM186BQ8IYM0 893 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 BORCS6Q96GS4 357 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 TOPORSQ9NS56 1045 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-218ENST00000479897 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 GOLGA8IPA6NC78 632 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 GOLGA8JA6NMD2 632 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ENPP3O14638 875 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 RECQL4O94761 1208 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 IL18RAPO95256 599 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 SYN1P17600 705 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 TNFSF9P41273 254 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ACOT2P49753 483 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 TPM4P67936 248 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 BFSP1Q12934 665 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 PSMD6Q15008 389 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 SURF1Q15526 300 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ENOX2Q16206 610 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 C16orf59Q7L2K0 433 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 USP37Q86T82 979 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 SNX27Q96L92 541 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ASB7Q9H672 318 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 RBAKQ9NYW8 714 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 GIT1Q9Y2X7 761 aa13.64□□□□□ -0.23
TRAPPC12-218ENST00000479897 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 MEFVO15553 781 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 CXCL8P10145 99 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 ITGA4P13612 1032 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 CLDN10P78369 228 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 TCP11X2Q5H9J9 407 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 ALKAL1Q6UXT8 129 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 AGMOQ6ZNB7 445 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 NT5DC4Q86YG4 428 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 NPAS4Q8IUM7 802 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 TMEM192Q8IY95 271 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 EEF2KMTQ96G04 330 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms