RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 AMNQ9BXJ7 453 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 CHMP4AQ9BY43 222 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 PRDM12Q9H4Q4 367 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 ANLNQ9NQW6 1124 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 GALNT8Q9NY28 637 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 DPP7Q9UHL4 492 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 TMPRSS11EQ9UL52 423 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 DAPK1P53355 1430 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 UBR3Q6ZT12 1888 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 PPLO60437 1756 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 RGPD5Q99666 1765 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 CACNA1GO43497 2377 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 TAF1LQ8IZX4 1826 aa6.71□□□□□ -1.33
UPF3A-205ENST00000479712 NSD2O96028 1365 aa6.71□□□□□ -1.33
UPF3A-205ENST00000479712 C4BP0C0L5 1744 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 ERC2O15083 957 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 NDUFS2O75306 463 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 PEX14O75381 377 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 PCDH8O95206 1070 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 AKAP5P24588 427 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 VIPR1P32241 457 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
UPF3A-205ENST00000479712 BCAR1P56945 870 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 SPIDRQ14159 915 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 TRIM25Q14258 630 aaKnown RBP6.71□□□□□ -1.34
UPF3A-205ENST00000479712 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.34
UPF3A-205ENST00000479712 MBNL2Q5VZF2 373 aaKnown RBP6.71□□□□□ -1.34
UPF3A-205ENST00000479712 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 ARNT2Q9HBZ2 717 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 TUBD1Q9UJT1 453 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 RCAN3Q9UKA8 241 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 STXBP5LQ9Y2K9 1186 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 ADAMTSL1Q8N6G6 1762 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 MYPNQ86TC9 1320 aa6.71□□□□□ -1.34
UPF3A-205ENST00000479712 VPS8Q8N3P4 1428 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 C8BP07358 591 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 NCAM1P13591 858 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 CDK17Q00537 523 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 KIF23Q02241 960 aaPredicted RBP6.7□□□□□ -1.34
UPF3A-205ENST00000479712 PPARAQ07869 468 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
UPF3A-205ENST00000479712 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 ARHGAP29Q52LW3 1261 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 KSR2Q6VAB6 950 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 CBLL1Q75N03 491 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 LYSMD2Q8IV50 215 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 PPM1NQ8N819 430 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 OR14C36Q8NHC7 312 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 WDR48Q8TAF3 677 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 TSPEARQ8WU66 669 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 RSAD2Q8WXG1 361 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 ZNF552Q9H707 407 aaPredicted RBP6.7□□□□□ -1.34
UPF3A-205ENST00000479712 IFT122Q9HBG6 1241 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 DLL4Q9NR61 685 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 PRSS50Q9UI38 385 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 WASF3Q9UPY6 502 aa6.7□□□□□ -1.34
UPF3A-205ENST00000479712 ABCC11Q96J66 1382 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 BIN1O00499 593 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 MAFGO15525 162 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 OFD1O75665 1012 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 CYP2C8P10632 490 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 FBLN1P23142 703 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
UPF3A-205ENST00000479712 CCT2P78371 535 aaKnown RBP6.69□□□□□ -1.34
UPF3A-205ENST00000479712 UAP1L1Q3KQV9 507 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 PPP4R4Q6NUP7 873 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 ZNF605Q86T29 641 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 DEFB123Q8N688 67 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 DTX3Q8N9I9 347 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 TMEM209Q96SK2 561 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 BTBD2Q9BX70 525 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 ACE2Q9BYF1 805 aaPredicted RBP6.69□□□□□ -1.34
UPF3A-205ENST00000479712 RNF38Q9H0F5 515 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 ARHGAP20Q9P2F6 1191 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 BRCA2P51587 3418 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 C4AP0C0L4 1744 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 KIF1BO60333 1816 aa6.69□□□□□ -1.34
UPF3A-205ENST00000479712 ANKRD50Q9ULJ7 1429 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 RANBP2P49792 3224 aaKnown RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 AP1G1O43747 822 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 OPHN1O60890 802 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 CELA3BP08861 270 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 EN2P19622 333 aaPredicted RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 MC3RP41968 323 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SLC16A1P53985 500 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 NFATC3Q12968 1075 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 GBX1Q14549 363 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 CST9Q5W186 159 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 CATIPQ7Z7H3 387 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SLC41A1Q8IVJ1 513 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 CDYL2Q8N8U2 506 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms