RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 EFEMP2O95967 443 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 NAMPTP43490 491 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 PEX3P56589 373 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 OSTNP61366 133 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 ATAT1Q5SQI0 421 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 TDRD5Q8NAT2 981 aaKnown RBP19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 RIN2Q8WYP3 895 aaPredicted RBP19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 ASIC4Q96FT7 647 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 COLEC11Q9BWP8 271 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 C2orf40Q9H1Z8 148 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 SFXN1Q9H9B4 322 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 GOLGA2P5Q9HBQ8 144 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 ADAM28Q9UKQ2 775 aa19.18■□□□□ 0.66
ECHDC1-216ENST00000479525 PDCD11Q14690 1871 aaKnown RBP19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 ST18O60284 1047 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 HIP1RO75146 1068 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 KIF4AO95239 1232 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 DSG1Q02413 1049 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 SIGLEC14Q08ET2 396 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 FAM187BQ17R55 369 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 RTP2Q5QGT7 225 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 ALYREFQ86V81 257 aaKnown RBP19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 CEP57Q86XR8 500 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 DAW1Q8N136 415 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 TMEM130Q8N3G9 435 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 PRSS33Q8NF86 280 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 IFT74Q96LB3 600 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 NECTIN4Q96NY8 510 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 PHOX2BQ99453 314 aa19.17■□□□□ 0.66
ECHDC1-216ENST00000479525 ACKR2O00590 384 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 TADA2AO75478 443 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 HARSP12081 509 aaKnown RBP19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 TAS1R3Q7RTX0 852 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 GPR149Q86SP6 731 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 PPFIBP1Q86W92 1011 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 MFSD14AQ96MC6 490 aa19.16■□□□□ 0.66
ECHDC1-216ENST00000479525 NPHP3-ACAD11A0A0J9YXS1 232 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 CCDC195A0A1B0GUA6 201 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 CARNS1A5YM72 827 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 VWA3AA6NCI4 1184 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 H3BQV1 296 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 NR1I2O75469 434 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 GLUD1P00367 558 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 ADH1AP07327 375 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 MAPK7Q13164 816 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 NAB2Q15742 525 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 KRT79Q5XKE5 535 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 DTHD1Q6ZMT9 781 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 PNMA5Q96PV4 448 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 ADPGKQ9BRR6 497 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 CHST7Q9NS84 486 aa19.15■□□□□ 0.66
ECHDC1-216ENST00000479525 I3L4J1 428 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 ADAM12O43184 909 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 N4BP1O75113 896 aaKnown RBP19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 THP07101 528 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 NPTX2P47972 431 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 NHLH1Q02575 133 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 TUSC3Q13454 348 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 PDIA5Q14554 519 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 PPP2R5AQ15172 486 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 USP41Q3LFD5 358 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 FAM171A1Q5VUB5 890 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 RINT1Q6NUQ1 792 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 CCDC149Q6ZUS6 474 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 SUGP1Q8IWZ8 645 aaKnown RBP19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 KIFAP3Q92845 792 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 ZBTB45Q96K62 511 aaPredicted RBP19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 TARS2Q9BW92 718 aaKnown RBP19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 RXFP1Q9HBX9 757 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 DNM3Q9UQ16 869 aa19.14■□□□□ 0.65
ECHDC1-216ENST00000479525 ZDBF2Q9HCK1 2354 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 K7ERI5 159 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 SLC16A4O15374 487 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 TGM5O43548 720 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 MUTP22033 750 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 HOXD11P31277 338 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 SEZ6Q53EL9 994 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 FBXL6Q8N531 539 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 RSAD2Q8WXG1 361 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 CDT1Q9H211 546 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 FAM86C1Q9NVL1 165 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 SORCS3Q9UPU3 1222 aa19.13■□□□□ 0.65
ECHDC1-216ENST00000479525 ANK1P16157 1881 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 ATP2C1P98194 919 aaPredicted RBP19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 DHX8Q14562 1220 aaKnown RBP19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 C1orf186Q6ZWK4 172 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 BMP8AQ7Z5Y6 402 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 LRRC15Q8TF66 581 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 SMG7Q92540 1137 aaKnown RBP19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 RAB34Q9BZG1 259 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 KMT5AQ9NQR1 393 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 SMC3Q9UQE7 1217 aa19.12■□□□□ 0.65
ECHDC1-216ENST00000479525 SF3B1O75533 1304 aaKnown RBP eCLIP19.11■□□□□ 0.658e-6■■■■■ 107
ECHDC1-216ENST00000479525 PHLPP2Q6ZVD8 1323 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 GBP2P32456 591 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms