RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SAMD1Q6SPF0 538 aaPredicted RBP26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 MAIP1Q8WWC4 291 aa26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 SEMA4DQ92854 862 aa26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 NTPCRQ9BSD7 190 aaKnown RBP26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 GLIS2Q9BZE0 524 aaPredicted RBP26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 ROPN1BQ9BZX4 212 aaPredicted RBP26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 ROPN1Q9HAT0 212 aaPredicted RBP26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 VEZTQ9HBM0 779 aa26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 GINM1Q9NU53 330 aa26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 TCEAL9Q9UHQ7 104 aa26.42■■□□□ 1.82
SYNGAP1-206ENST00000479510 MMEP08473 750 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 ADSSP30520 456 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 DMP1Q13316 513 aaPredicted RBP26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 SLC29A2Q14542 456 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 XRRA1Q6P2D8 792 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 CBWD2Q8IUF1 395 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 CCDC105Q8IYK2 499 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 RTKN2Q8IZC4 609 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 TMEM39BQ9GZU3 492 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 SLC38A10Q9HBR0 1119 aa26.41■■□□□ 1.82
SYNGAP1-206ENST00000479510 MAN1A1P33908 653 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 LACTB2Q53H82 288 aaPredicted RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 XKR9Q5GH70 373 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 TNFAIP8L3Q5GJ75 292 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 SWT1Q5T5J6 900 aaKnown RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 FBXW10Q5XX13 1052 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 SYDE1Q6ZW31 735 aaPredicted RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 TRMT10CQ7L0Y3 403 aaKnown RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 CPLX4Q7Z7G2 160 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 ZSWIM2Q8NEG5 633 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 CCDC134Q9H6E4 229 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 GOLGA6L7A0A1B0GV03 622 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 FSCN2O14926 492 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 RARAP10276 462 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 CNGA1P29973 690 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 PGM5Q15124 567 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 QPCTQ16769 361 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 FAM102BQ5T8I3 360 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 MFSD5Q6N075 450 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 MIGA2Q7L4E1 593 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 PSPC1Q8WXF1 523 aaKnown RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 DDX1Q92499 740 aaKnown RBP26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 ZNF341Q9BYN7 854 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 WHRNQ9P202 907 aa26.4■■□□□ 1.82
SYNGAP1-206ENST00000479510 ECEL1O95672 775 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 ABCD1P33897 745 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 NPTX2P47972 431 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 GCNT1Q02742 428 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 UGCGQ16739 394 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 SENP7Q9BQF6 1050 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 SEMA4AQ9H3S1 761 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 AVENQ9NQS1 362 aaPredicted RBP26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 RAB20Q9NX57 234 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 RGPD3A6NKT7 1758 aaPredicted RBP26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 RGPD4Q7Z3J3 1758 aa26.39■■□□□ 1.82
SYNGAP1-206ENST00000479510 GOLGA8IPA6NC78 632 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 GOLGA8JA6NMD2 632 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 RIPK2O43353 540 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 KCNV1Q6PIU1 500 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 CCDC13Q8IYE1 715 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 AGBL3Q8NEM8 1001 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 KIAA1683Q9H0B3 1180 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 VPS33BQ9H267 617 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 LRRC4CQ9HCJ2 640 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 GPRC5CQ9NQ84 441 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 BCS1LQ9Y276 419 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 ANKRD63C9JTQ0 380 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 MYBL1P10243 752 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 GHRP10912 638 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 CALCOCO2Q13137 446 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 CLEC16AQ2KHT3 1053 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 TRIM11Q96F44 468 aa26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 ZNF317Q96PQ6 595 aaPredicted RBP26.38■■□□□ 1.81
SYNGAP1-206ENST00000479510 ASAP2O43150 1006 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ATMINO43313 823 aaPredicted RBP26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 GRIN3BO60391 1043 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 CTNND1O60716 968 aaKnown RBP26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 DKC1O60832 514 aaKnown RBP eCLIP26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 RAD17O75943 681 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 FDX1P10109 184 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 RTP1P59025 263 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 RNF207Q6ZRF8 634 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 OTUD6AQ7L8S5 288 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ZNF677Q86XU0 584 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ZBED3Q96IU2 234 aaPredicted RBP26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 KDM4CQ9H3R0 1056 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 KMT5AQ9NQR1 393 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 C21orf2O43822 256 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 CHN1P15882 459 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 CYP24A1Q07973 514 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ZNF568Q3ZCX4 644 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 TAOK1Q7L7X3 1001 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ATXN2LQ8WWM7 1075 aaKnown RBP26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 TAAR1Q96RJ0 339 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 ADAM7Q9H2U9 754 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 AZI2Q9H6S1 392 aa26.37■■□□□ 1.81
SYNGAP1-206ENST00000479510 DENND3A2RUS2 1198 aa26.36■■□□□ 1.81
SYNGAP1-206ENST00000479510 VGLL3A8MV65 326 aa26.36■■□□□ 1.81
SYNGAP1-206ENST00000479510 CCNE2O96020 404 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms