RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CCNYQ8ND76 341 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 PPP4R1Q8TF05 950 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 SAYSD1Q9NPB0 183 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 CIITAP33076 1130 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 SERPINB6P35237 376 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 CARSP49589 748 aaKnown RBP15.25■□□□□ 0.03
COL20A1-206ENST00000479501 RNASELQ05823 741 aaKnown RBP15.25■□□□□ 0.03
COL20A1-206ENST00000479501 TMEM119Q4V9L6 283 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 HSPH1Q92598 858 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 GGA3Q9NZ52 723 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 RNF181Q9P0P0 153 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 WNT7AO00755 349 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 CA4P22748 312 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 INTUQ9ULD6 942 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 ALG6Q9Y672 507 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 CCDC117Q8IWD4 279 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 MMP19Q99542 508 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 FUT8Q9BYC5 575 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 TMEM8AQ9HCN3 771 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 HPCAL4Q9UM19 191 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 RAD51CO43502 376 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 ZBED1O96006 694 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 MT-ND3P03897 115 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 MMEP08473 750 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 EMC2Q15006 297 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 BEND6Q5SZJ8 279 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 NCAPGQ9BPX3 1015 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 FAM208AQ9UK61 1670 aaKnown RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 CPP00450 1065 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 PRLRP16471 622 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 TAL1P17542 331 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 PPP2R2AP63151 447 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 PDE1BQ01064 536 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 TFDP2Q14188 446 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 IL17AQ16552 155 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 KIAA1755Q5JYT7 1200 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 ZNF720Q7Z2F6 126 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 RDM1Q8NG50 284 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 OLFML3Q9NRN5 406 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 TTC7AQ9ULT0 858 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-206ENST00000479501 CXCL9Q07325 125 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 KCNV1Q6PIU1 500 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 SLC30A10Q6XR72 485 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 HACL1Q9UJ83 578 aa15.24■□□□□ 0.03
COL20A1-206ENST00000479501 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PRKCBP05771 671 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TXNP10599 105 aaKnown RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 COPB2P35606 906 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PPP6R3Q5H9R7 873 aaPredicted RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 WDR93Q6P2C0 686 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 AFAP1L2Q8N4X5 818 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 GPRASP2Q96D09 838 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 HVCN1Q96D96 273 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 KCND1Q9NSA2 647 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PARVAQ9NVD7 372 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PCSK1NQ9UHG2 260 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PCDHB2Q9Y5E7 798 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 LOC102724159A0A0B4J2E5 919 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 FOXN3O00409 490 aaPredicted RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 NFIBO00712 420 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 RCN2Q14257 317 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 PWP2Q15269 919 aaKnown RBP15.23■□□□□ 0.03
COL20A1-206ENST00000479501 CCT6BQ92526 530 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TSC22D3Q99576 134 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TRIM51Q9BSJ1 452 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TEX2Q8IWB9 1127 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TPCN2Q8NHX9 752 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 CPA5Q8WXQ8 436 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 C17orf75Q9HAS0 396 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 ASNSD1Q9NWL6 643 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 TBX20Q9UMR3 447 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
COL20A1-206ENST00000479501 KLRC4O43908 158 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 SLC1A1P43005 524 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 NCOA4Q13772 614 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 RSRC2Q7L4I2 434 aaKnown RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 FAM83AQ86UY5 434 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms