RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 DAGLBQ8NCG7 672 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 FAM20AQ96MK3 541 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
DDX56-210ENST00000479440 WRAP73Q9P2S5 460 aaPredicted RBP17.9■□□□□ 0.46
DDX56-210ENST00000479440 POLIQ9UNA4 740 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 M0R2N6 131 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 LILRB5O75023 590 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 POU2F2P09086 479 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 NTHL1P78549 312 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 POU5F1BQ06416 359 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 PSMD5Q16401 504 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 RTP2Q5QGT7 225 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 GALNT17Q6IS24 598 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 PDXDC1Q6P996 788 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 SLC27A1Q6PCB7 646 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 PRSS55Q6UWB4 352 aaPredicted RBP17.89■□□□□ 0.45
DDX56-210ENST00000479440 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 PIK3R5Q8WYR1 880 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 NELL2Q99435 816 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 TTPALQ9BTX7 342 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 FAM126AQ9BYI3 521 aaPredicted RBP17.89■□□□□ 0.45
DDX56-210ENST00000479440 AGXT2Q9BYV1 514 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 PRMT8Q9NR22 394 aaPredicted RBP17.89■□□□□ 0.45
DDX56-210ENST00000479440 MRPS17Q9Y2R5 130 aaKnown RBP17.89■□□□□ 0.45
DDX56-210ENST00000479440 MTF2Q9Y483 593 aaPredicted RBP17.89■□□□□ 0.45
DDX56-210ENST00000479440 COL4A3Q01955 1670 aa17.89■□□□□ 0.45
DDX56-210ENST00000479440 NCOR2Q9Y618 2525 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 CCL16O15467 120 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 DEXIO95424 95 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 GCFC2P16383 781 aaKnown RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 AKAP5P24588 427 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 TARSP26639 723 aaKnown RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 RPS9P46781 194 aaKnown RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 MBTD1Q05BQ5 628 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 SSRP1Q08945 709 aaKnown RBP17.88■□□□□ 0.45
DDX56-210ENST00000479440 EPHA7Q15375 998 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 INF2Q27J81 1249 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 XKR9Q5GH70 373 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 ZNF852Q6ZMS4 543 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 GSTCDQ8NEC7 633 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 NELL1Q92832 810 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 CLDN23Q96B33 292 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 KXD1Q9BQD3 176 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 KCNMB3Q9NPA1 279 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 RAB23Q9ULC3 237 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 KCNH3Q9ULD8 1083 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 ARID2Q68CP9 1835 aa17.88■□□□□ 0.45
DDX56-210ENST00000479440 NPTXRO95502 500 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 RPS6KB1P23443 525 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 ELAVL2Q12926 359 aaKnown RBP17.87■□□□□ 0.45
DDX56-210ENST00000479440 TUSC3Q13454 348 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 CAPSQ13938 189 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 AMHR2Q16671 573 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 PABPC1LQ4VXU2 614 aaKnown RBP17.87■□□□□ 0.45
DDX56-210ENST00000479440 NCAPH2Q6IBW4 605 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 CEP57Q86XR8 500 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 NPAS3Q8IXF0 933 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 ITFG1Q8TB96 612 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 SLC7A14Q8TBB6 771 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 HASPINQ8TF76 798 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
DDX56-210ENST00000479440 NAP1L4Q99733 375 aaKnown RBP17.87■□□□□ 0.45
DDX56-210ENST00000479440 CLSTN3Q9BQT9 956 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 NFKBIZQ9BYH8 718 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 ZSWIM4Q9H7M6 989 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 NCOA5Q9HCD5 579 aaKnown RBP17.87■□□□□ 0.45
DDX56-210ENST00000479440 PARP2Q9UGN5 583 aa17.87■□□□□ 0.45
DDX56-210ENST00000479440 TBX3O15119 743 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 MARCH6O60337 910 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 KIF4AO95239 1232 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 CD72P21854 359 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
DDX56-210ENST00000479440 PPP2R5DQ14738 602 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 ST3GAL2Q16842 350 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 FAM171A1Q5VUB5 890 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 PPP4R3AQ6IN85 833 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 RABGGTAQ92696 567 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 KCNB2Q92953 911 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 CCDC43Q96MW1 224 aaKnown RBP17.86■□□□□ 0.45
DDX56-210ENST00000479440 IER2Q9BTL4 223 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 XPNPEP1Q9NQW7 623 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 KLK14Q9P0G3 267 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 CEP250Q9BV73 2442 aa17.86■□□□□ 0.45
DDX56-210ENST00000479440 CCDC194A0A1B0GVG4 234 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 CASTOR2A6NHX0 329 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 CPLX1O14810 134 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 CDC45O75419 566 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 ECI2O75521 394 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 ADRB1P08588 477 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 NRLP54845 237 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 CYP4A11Q02928 519 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 UVSSAQ2YD98 709 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 RTL10Q7L3V2 364 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 NEK8Q86SG6 692 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 LNX1Q8TBB1 728 aaPredicted RBP17.85■□□□□ 0.45
DDX56-210ENST00000479440 DNASE1L2Q92874 299 aa17.85■□□□□ 0.45
DDX56-210ENST00000479440 DYDC2Q96IM9 177 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms