RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
CNKSR3-204ENST00000479339 SLX1AQ9BQ83 275 aa14.09□□□□□ -0.15
CNKSR3-204ENST00000479339 FAM207AQ9NSI2 230 aaPredicted RBP14.09□□□□□ -0.15
CNKSR3-204ENST00000479339 USP20Q9Y2K6 914 aa14.09□□□□□ -0.15
CNKSR3-204ENST00000479339 NAV1Q8NEY1 1877 aa14.09□□□□□ -0.15
CNKSR3-204ENST00000479339 POTEFA5A3E0 1075 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 FAM205CA6NFA0 338 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 TJP3O95049 919 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 SLC18A3Q16572 532 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 ABCB5Q2M3G0 1257 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 C12orf42Q96LP6 360 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 NR1H4Q96RI1 486 aaPredicted RBP14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 CARD9Q9H257 536 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 PREBQ9HCU5 417 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 IL1RAPL1Q9NZN1 696 aa14.08□□□□□ -0.15
CNKSR3-204ENST00000479339 SIGLEC16A6NMB1 481 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 CETN3O15182 167 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 MAFGO15525 162 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 PRKAB2O43741 272 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 AFPP02771 609 aaKnown RBP14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 FAM200BP0CF97 657 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 ATP5DP30049 168 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 IFNAR2P48551 515 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 SERPINB4P48594 390 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 RNASE9P60153 205 aaKnown RBP14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 RCN2Q14257 317 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 ANKRD40Q6AI12 368 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 INTS8Q75QN2 995 aaKnown RBP14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 LONP2Q86WA8 852 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 FAM13CQ8NE31 585 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 DDX47Q9H0S4 455 aaKnown RBP14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 EPB41L4BQ9H329 900 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 CEP72Q9P209 647 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 ZSWIM5Q9P217 1185 aa14.08□□□□□ -0.16
CNKSR3-204ENST00000479339 TCP11X1B4DZS4 312 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 EPHB6O15197 1021 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 HNRNPCL1O60812 293 aaKnown RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 CYP2D6P10635 497 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 PRKCZQ05513 592 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 LSAMPQ13449 338 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 CLUL1Q15846 466 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 Q4G0T1 1027 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 SFMBT2Q5VUG0 894 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 RAET1EQ8TD07 263 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 GATA6Q92908 595 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 OLFM3Q96PB7 478 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 CENPKQ9BS16 269 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 DPH5Q9H2P9 285 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 KBTBD4Q9NVX7 518 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 MORF4L1Q9UBU8 362 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 TTC7AQ9ULT0 858 aaPredicted RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 TRIM33Q9UPN9 1127 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 WDR37Q9Y2I8 494 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 FAM187AA6NFU0 413 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 RPL13P26373 211 aaKnown RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 DRG2P55039 364 aaKnown RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 EVX2Q03828 476 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 EARS2Q5JPH6 523 aaKnown RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 LRRC8CQ8TDW0 803 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 LZTS2Q9BRK4 669 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.164e-6■■■■■ 64.1
CNKSR3-204ENST00000479339 AMACRQ9UHK6 382 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 GABRQQ9UN88 632 aa14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 PACSIN2Q9UNF0 486 aaPredicted RBP14.07□□□□□ -0.16
CNKSR3-204ENST00000479339 TRAFD1O14545 582 aaPredicted RBP14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 TTI1O43156 1089 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 ATP9AO75110 1047 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 GRK4P32298 578 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 IRF5Q13568 498 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 CNPY1Q3B7I2 92 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 CEP128Q6ZU80 1094 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 PHC3Q8NDX5 983 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 GTF3C2Q8WUA4 911 aaPredicted RBP14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 UCMAQ8WVF2 138 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 CKAP2Q8WWK9 683 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 DDX23Q9BUQ8 820 aaKnown RBP14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 ZDHHC18Q9NUE0 388 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 DIS3Q9Y2L1 958 aaKnown RBP14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 SLC4A4Q9Y6R1 1079 aa14.06□□□□□ -0.16
CNKSR3-204ENST00000479339 SMAPO00193 183 aa14.05□□□□□ -0.16
CNKSR3-204ENST00000479339 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
CNKSR3-204ENST00000479339 IFI35P80217 286 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms