RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MRPL44Q9H9J2 332 aaKnown RBP16.94■□□□□ 0.3
C9orf3-217ENST00000479161 PLEKHA5Q9HAU0 1116 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 NGRNQ9NPE2 291 aaKnown RBP16.94■□□□□ 0.3
C9orf3-217ENST00000479161 SNTG2Q9NY99 539 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 EXOC7Q9UPT5 735 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 INPP5FQ9Y2H2 1132 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
C9orf3-217ENST00000479161 NR1I2O75469 434 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 DDHD2O94830 711 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 AKAP5P24588 427 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
C9orf3-217ENST00000479161 SYKP43405 635 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 AFF1P51825 1210 aaKnown RBP16.93■□□□□ 0.3
C9orf3-217ENST00000479161 POSTNQ15063 836 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 UNC13DQ70J99 1090 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 POF1BQ8WVV4 589 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 TMEM169Q96HH4 297 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 ZFP42Q96MM3 310 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 ALG13Q9NP73 1137 aaKnown RBP16.93■□□□□ 0.3
C9orf3-217ENST00000479161 MIOSQ9NXC5 875 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 HCSTQ9UBK5 93 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 PARP2Q9UGN5 583 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 COG5Q9UP83 839 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 USP20Q9Y2K6 914 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
C9orf3-217ENST00000479161 PDCD11Q14690 1871 aaKnown RBP16.93■□□□□ 0.3
C9orf3-217ENST00000479161 A0A0B4J269 797 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 FSCN2O14926 492 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 ZC3H11AO75152 810 aaKnown RBP eCLIP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 EFEMP2O95967 443 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 POMCP01189 267 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 THP07101 528 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 ADRB2P07550 413 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 CLTAP09496 248 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 IDEP14735 1019 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 KCNE1P15382 129 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 LIG4P49917 911 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 SCNN1GP51170 649 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 YARSP54577 528 aaKnown RBP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 DDX53Q86TM3 631 aaKnown RBP16.92■□□□□ 0.3
C9orf3-217ENST00000479161 CCDC34Q96HJ3 373 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 ACAP3Q96P50 834 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 TMEM206Q9H813 350 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 TLR9Q9NR96 1032 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 FAN1Q9Y2M0 1017 aa16.92■□□□□ 0.3
C9orf3-217ENST00000479161 PTGESO14684 152 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 NRP1O14786 923 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 OGTO15294 1046 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-217ENST00000479161 FAM189A1O60320 539 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 DNAJB1P25685 340 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 SLC11A1P49279 550 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 NDUFA8P51970 172 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
C9orf3-217ENST00000479161 COASYQ13057 564 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 TUSC3Q13454 348 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 NAB2Q15742 525 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 KANK3Q6NY19 840 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 BICD1Q96G01 975 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 PAGE5Q96GU1 130 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 CHAMP1Q96JM3 812 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 ZBTB45Q96K62 511 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-217ENST00000479161 PPP1R10Q96QC0 940 aaKnown RBP16.91■□□□□ 0.3
C9orf3-217ENST00000479161 ACCSQ96QU6 501 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 CDCA3Q99618 268 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-217ENST00000479161 APOL6Q9BWW8 343 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 SLC38A7Q9NVC3 462 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
C9orf3-217ENST00000479161 SPTBN5Q9NRC6 3674 aaKnown RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 DLL1O00548 723 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 KIAA0391O15091 583 aaKnown RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 B4GALT3O60512 393 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 ASIC1P78348 528 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 PSMD2Q13200 908 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 ZC2HC1CQ53FD0 456 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 SLC39A4Q6P5W5 647 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 CD302Q8IX05 232 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 ELOA2Q8IYF1 753 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 RNF168Q8IYW5 571 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-217ENST00000479161 FSIP1Q8NA03 581 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 STAMQ92783 540 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 UROC1Q96N76 676 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 COLEC11Q9BWP8 271 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 HAPLN2Q9GZV7 340 aa16.9■□□□□ 0.3
C9orf3-217ENST00000479161 UBE4BO95155 1302 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms