RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 UBXN1Q04323 297 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CALD1Q05682 793 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 RASA2Q15283 850 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TAF7Q15545 349 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 KAZNQ674X7 775 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 DENND5AQ6IQ26 1287 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 RSPO2Q6UXX9 243 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 FAM47EQ6ZV65 393 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 OTOP1Q7RTM1 612 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 COL23A1Q86Y22 540 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 THEMISQ8N1K5 641 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CCDC33Q8N5R6 958 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 PCDH19Q8TAB3 1148 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 EYA3Q99504 573 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 EDEM3Q9BZQ6 932 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TRIM6Q9C030 488 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 PNPLA8Q9NP80 782 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TMOD4Q9NZQ9 345 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 PCOLCE2Q9UKZ9 415 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 SRPK3Q9UPE1 567 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CEP83Q9Y592 693 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 ZFP37Q9Y6Q3 630 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 A0A1W2PPC4 97 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 CCDC66A2RUB6 948 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 SLC7A4O43246 635 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TBCAO75347 108 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 GOSR1O95249 250 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 IL18RAPO95256 599 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 SCG2P13521 617 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ATP5F1P24539 256 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 GRK4P32298 578 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ANP32AP39687 249 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 LIMK1P53667 647 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ARF3P61204 181 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ARF1P84077 181 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ADAM15Q13444 863 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TMED1Q13445 227 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 DAG1Q14118 895 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TNIP1Q15025 636 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 PRSS53Q2L4Q9 553 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 WFDC3Q8IUB2 231 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 PHACTR4Q8IZ21 702 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TCP11L2Q8N4U5 519 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TTLL11Q8NHH1 800 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 GOT1L1Q8NHS2 421 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 NETO1Q8TDF5 533 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF845Q96IR2 970 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 MOGAT1Q96PD6 335 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 PDCD2LQ9BRP1 358 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 OR10A4Q9H209 315 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 RANBP17Q9H2T7 1088 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 EPB41L4AQ9HCS5 686 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 PICK1Q9NRD5 415 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 POGKQ9P215 609 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 SPO11Q9Y5K1 396 aa6.53□□□□□ -1.36
RC3H1-204ENST00000479099 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
RC3H1-204ENST00000479099 FLT1P17948 1338 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PES1O00541 588 aaKnown RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 AKR1B10O60218 316 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PTP4A3O75365 173 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CLTBP09497 229 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 RPS2P15880 293 aaKnown RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PORP16435 677 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 HDCP19113 662 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CHMP24386 653 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CTSSP25774 331 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 EEF1GP26641 437 aaKnown RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 IFI35P80217 286 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 HMGN5P82970 282 aaKnown RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CYP4F3Q08477 520 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 KIAA2012Q0VF49 1180 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PTK2BQ14289 1009 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 SURF1Q15526 300 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 MMEL1Q495T6 779 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 ODF2Q5BJF6 829 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 TANGO2Q6ICL3 276 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 OGFOD2Q6N063 350 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF574Q6ZN55 896 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 FRMD7Q6ZUT3 714 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 B4GALNT4Q76KP1 1039 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CCDC91Q7Z6B0 441 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 DNAJB7Q7Z6W7 309 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF619Q8N2I2 560 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 TRIML1Q8N9V2 468 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 ADCY4Q8NFM4 1077 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CREB3L4Q8TEY5 395 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms