RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ITGB1P05556 798 aa22.41■■□□□ 1.18
VARS-224ENST00000479051 MCL1Q07820 350 aa22.41■■□□□ 1.18
VARS-224ENST00000479051 KYAT1Q16773 422 aa22.41■■□□□ 1.18
VARS-224ENST00000479051 TIGD5Q53EQ6 642 aa22.41■■□□□ 1.18
VARS-224ENST00000479051 ZC2HC1CQ53FD0 456 aaPredicted RBP22.41■■□□□ 1.18
VARS-224ENST00000479051 ACCSQ96QU6 501 aa22.41■■□□□ 1.18
VARS-224ENST00000479051 ALG13Q9NP73 1137 aaKnown RBP22.41■■□□□ 1.18
VARS-224ENST00000479051 GRM6O15303 877 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 PPP1R37O75864 691 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 AFF1P51825 1210 aaKnown RBP22.4■■□□□ 1.18
VARS-224ENST00000479051 L1TD1Q5T7N2 865 aaKnown RBP22.4■■□□□ 1.18
VARS-224ENST00000479051 SLFN12LQ6IEE8 588 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 SLC39A11Q8N1S5 342 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 SPPL3Q8TCT6 385 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 TMEM169Q96HH4 297 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 ZBTB45Q96K62 511 aaPredicted RBP22.4■■□□□ 1.18
VARS-224ENST00000479051 ACAP3Q96P50 834 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 BLZF1Q9H2G9 400 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 LZTS1Q9Y250 596 aa22.4■■□□□ 1.18
VARS-224ENST00000479051 ABLIM1O14639 778 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 ZNF202O95125 648 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 ALDH2P05091 517 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 GALTP07902 379 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 OSTNP61366 133 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 PLCB3Q01970 1234 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 CUL4BQ13620 913 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 FAM26FQ5R3K3 315 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 KANK3Q6NY19 840 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 ZNF280BQ86YH2 543 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 SYCP3Q8IZU3 236 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 POF1BQ8WVV4 589 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 PPM1EQ8WY54 764 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 CCDC47Q96A33 483 aaKnown RBP22.39■■□□□ 1.17
VARS-224ENST00000479051 STRA6Q9BX79 667 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 GOLPH3LQ9H4A5 285 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 TMEM206Q9H813 350 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 FAN1Q9Y2M0 1017 aa22.39■■□□□ 1.17
VARS-224ENST00000479051 DDHD2O94830 711 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 THP07101 528 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 MYBP10242 640 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 PBX3P40426 434 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 BMS1Q14692 1282 aaKnown RBP22.38■■□□□ 1.17
VARS-224ENST00000479051 KRBA2Q6ZNG9 492 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 GRAMD1CQ8IYS0 662 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 CEP120Q8N960 986 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 PPP2R3CQ969Q6 453 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 IPO9Q96P70 1041 aaKnown RBP22.38■■□□□ 1.17
VARS-224ENST00000479051 MSTO1Q9BUK6 570 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 MIOSQ9NXC5 875 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 DNAJB4Q9UDY4 337 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 STK39Q9UEW8 545 aa22.38■■□□□ 1.17
VARS-224ENST00000479051 TRANK1O15050 2925 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 OGTO15294 1046 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 CASP1P29466 404 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 OR1G1P47890 313 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 SLC11A1P49279 550 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 DSC1Q08554 894 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 POSTNQ15063 836 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 CCDC85BQ15834 202 aaPredicted RBP22.37■■□□□ 1.17
VARS-224ENST00000479051 PDE12Q6L8Q7 609 aaKnown RBP22.37■■□□□ 1.17
VARS-224ENST00000479051 COLGALT2Q8IYK4 626 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 GSTCDQ8NEC7 633 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 NSUN3Q9H649 340 aaKnown RBP22.37■■□□□ 1.17
VARS-224ENST00000479051 TLR9Q9NR96 1032 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 EXOC1Q9NV70 894 aa22.37■■□□□ 1.17
VARS-224ENST00000479051 TDRD15B5MCY1 1934 aaKnown RBP22.36■■□□□ 1.17
VARS-224ENST00000479051 A0A0B4J269 797 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 NT5C1B-RDH14C9J2C7 533 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 EIF3DO15371 548 aaKnown RBP eCLIP22.36■■□□□ 1.17
VARS-224ENST00000479051 CLTAP09496 248 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 CASP5P51878 434 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 FAM160A1Q05DH4 1040 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 TUSC3Q13454 348 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 SKIV2LQ15477 1246 aaKnown RBP22.36■■□□□ 1.17
VARS-224ENST00000479051 MICAL1Q8TDZ2 1067 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 IGSF21Q96ID5 467 aa22.36■■□□□ 1.17
VARS-224ENST00000479051 UBE4BO95155 1302 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 PTGESO14684 152 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 PRPF6O94906 941 aaKnown RBP22.35■■□□□ 1.17
VARS-224ENST00000479051 CSPG5O95196 566 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 SLC39A4Q6P5W5 647 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 POMGNT1Q8WZA1 660 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 HPS3Q969F9 1004 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 SNX27Q96L92 541 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 COLEC11Q9BWP8 271 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 ENTPD7Q9NQZ7 604 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 TSHZ2Q9NRE2 1034 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 SLC38A7Q9NVC3 462 aa22.35■■□□□ 1.17
VARS-224ENST00000479051 HOOK1Q9UJC3 728 aaKnown RBP22.35■■□□□ 1.17
VARS-224ENST00000479051 PRG3Q9Y2Y8 225 aaPredicted RBP22.35■■□□□ 1.17
VARS-224ENST00000479051 PRRC2BQ5JSZ5 2229 aaKnown RBP22.35■■□□□ 1.17
VARS-224ENST00000479051 CDH23Q9H251 3354 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 NRP1O14786 923 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 B4GALT3O60512 393 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 EHHADHQ08426 723 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 PSMD2Q13200 908 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 FMR1NBQ8N0W7 255 aaPredicted RBP22.34■■□□□ 1.17
VARS-224ENST00000479051 FGFBP2Q9BYJ0 223 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 HAPLN2Q9GZV7 340 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 RPF1Q9H9Y2 349 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms