RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CPNE8Q86YQ8 564 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 FLAD1Q8NFF5 587 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 KLHL29Q96CT2 875 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 FRMPD4Q14CM0 1322 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 FESP07332 822 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
CCDC78-210ENST00000478979 PPP3CAQ08209 521 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 BFSP1Q12934 665 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 BTBD6Q96KE9 485 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 FMO2Q99518 471 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 MXRA8Q9BRK3 442 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 APEX2Q9UBZ4 518 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 CCDC188H7C350 402 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 AHCYL1O43865 530 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 PPFIA2O75334 1257 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 LUC7L3O95232 432 aaKnown RBP15.13■□□□□ 0.01
CCDC78-210ENST00000478979 KRT13P13646 458 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 CAP2P40123 477 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 IFI35P80217 286 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-210ENST00000478979 MAPK7Q13164 816 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 TAF11Q15544 211 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 TAAR1Q96RJ0 339 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 AZI2Q9H6S1 392 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 FAM114A2Q9NRY5 505 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 AMFRQ9UKV5 643 aa15.13■□□□□ 0.01
CCDC78-210ENST00000478979 UTP11Q9Y3A2 253 aaKnown RBP15.13■□□□□ 0.01
CCDC78-210ENST00000478979 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-210ENST00000478979 ATP4AP20648 1035 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 SPP2Q13103 211 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 NSRP1Q9H0G5 558 aaKnown RBP15.12■□□□□ 0.01
CCDC78-210ENST00000478979 ADAM22Q9P0K1 906 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 C10orf71Q711Q0 1435 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 ASTN2O75129 1339 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-210ENST00000478979 ATP9AO75110 1047 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 MYBL1P10243 752 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 NEFHP12036 1026 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 PRKCIP41743 596 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-210ENST00000478979 RPS6KA3P51812 740 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 NT5DC3Q86UY8 548 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 UHMK1Q8TAS1 419 aaKnown RBP15.12■□□□□ 0.01
CCDC78-210ENST00000478979 GLG1Q92896 1179 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 GPR88Q9GZN0 384 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 EPB41L4BQ9H329 900 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 SLITRK6Q9H5Y7 841 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 EHMT1Q9H9B1 1298 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 TOPORSQ9NS56 1045 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-210ENST00000478979 TELO2Q9Y4R8 837 aa15.12■□□□□ 0.01
CCDC78-210ENST00000478979 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 SNX3O60493 162 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 MSH2P43246 934 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 MARCKSL1P49006 195 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 MTMR1Q13613 665 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 GNPTABQ3T906 1256 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 TRIM68Q6AZZ1 485 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 WNK4Q96J92 1243 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 STK33Q9BYT3 514 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 TXLNGYQ9BZA5 131 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 COG5Q9UP83 839 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 ZBTB48P10074 688 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 HOXA7P31268 230 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 ZNF131P52739 623 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 FKBP1AP62942 108 aaKnown RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 STXBP4Q6ZWJ1 553 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 ATP8B4Q8TF62 1192 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 NAF1Q96HR8 494 aaKnown RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 GOLGA6L10A0A0M3HER8 536 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 COPS2P61201 443 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 MRPS9P82933 396 aaKnown RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 TRAF1Q13077 416 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 RASA3Q14644 834 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 MESDQ14696 234 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 GALNTL6Q49A17 601 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 PGM2Q96G03 612 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 ERVK-5Q9HDB9 667 aa15.11■□□□□ 0.01
CCDC78-210ENST00000478979 LARSQ9P2J5 1176 aaKnown RBP15.11■□□□□ 0.01
CCDC78-210ENST00000478979 DPPA5A6NC42 116 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 DPEP1P16444 411 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
CCDC78-210ENST00000478979 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
CCDC78-210ENST00000478979 LMBRD2Q68DH5 695 aaPredicted RBP15.1■□□□□ 0.01
CCDC78-210ENST00000478979 CBWD2Q8IUF1 395 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 RPUSD2Q8IZ73 545 aaKnown RBP15.1■□□□□ 0.01
CCDC78-210ENST00000478979 TSC22D3Q99576 134 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 RAB17Q9H0T7 212 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 PNMA3Q9UL41 463 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 ZNF536O15090 1300 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 WNT10BO00744 389 aa15.1■□□□□ 0.01
CCDC78-210ENST00000478979 FTLP02792 175 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms