RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ZDHHC18Q9NUE0 388 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 PCDHAC2Q9Y5I4 1007 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 SPATA31A5Q5VU36 1347 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 SPATA31A7Q8IWB4 1347 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 A0A0A6YYK5 440 aaPredicted RBP11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 HIP1RO75146 1068 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 GDF11O95390 407 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 IL1R1P14778 569 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 VCAM1P19320 739 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 BPIFB4P59827 614 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 KLRC3Q07444 240 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 MAPK7Q13164 816 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 RINT1Q6NUQ1 792 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 LONP2Q86WA8 852 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 SMYD1Q8NB12 490 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 STK33Q9BYT3 514 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 CNOT10Q9H9A5 744 aaKnown RBP11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 SAMD15Q9P1V8 674 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 STK38LQ9Y2H1 464 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 LAMB2P55268 1798 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 GAKO14976 1311 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
LRRFIP1-211ENST00000478958 CCDC169A6NNP5 214 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 TISP43B9A030 160 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ANKRD63C9JTQ0 380 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 EXOC3O60645 756 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ACSL3O95573 720 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 FTLP02792 175 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 PAEPP09466 180 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 TMEM253P0C7T8 217 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 EIF3BP55884 814 aaKnown RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZDHHC24Q6UX98 284 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZDHHC14Q8IZN3 488 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 SLC30A5Q8TAD4 765 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 SEC14L1Q92503 715 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 LENG9Q96B70 501 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 RMDN2Q96LZ7 410 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 CORO1BQ9BR76 489 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 SH2D3AQ9BRG2 576 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ABCF3Q9NUQ8 709 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 NENFQ9UMX5 172 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 A8MUI8 341 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 CREB1P16220 341 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 HOXA7P31268 230 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 PPATQ06203 517 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 LONRF1Q17RB8 773 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 PHLDB3Q6NSJ2 640 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 TTC27Q6P3X3 843 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 HS2ST1Q7LGA3 356 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ANKRD42Q8N9B4 389 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 OLIG1Q8TAK6 271 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 FBF1Q8TES7 1133 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 DYDC2Q96IM9 177 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZNF317Q96PQ6 595 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 CARD9Q9H257 536 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ADAM7Q9H2U9 754 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 FRMD4BQ9Y2L6 1034 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 RPTORQ8N122 1335 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 NSMFQ6X4W1 530 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 FAM178BQ8IXR5 827 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 PRELID2Q8N945 189 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ZBTB8BQ8NAP8 495 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 NAP1L3Q99457 506 aaPredicted RBP11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 NACA2Q9H009 215 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 RASAL2Q9UJF2 1139 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 LRRC42Q9Y546 428 aa11.81□□□□□ -0.52
LRRFIP1-211ENST00000478958 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 NPEPPSP55786 919 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 USP46P62068 366 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 DLG4P78352 724 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 MYL7Q01449 175 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 TRIP13Q15645 432 aaPredicted RBP11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 KIF2BQ8N4N8 673 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 ATXN2LQ8WWM7 1075 aaKnown RBP11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 KAT5Q92993 513 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 NAP1L4Q99733 375 aaKnown RBP11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 APEX2Q9UBZ4 518 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 DDX39AO00148 427 aaKnown RBP11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 IGF2BP3O00425 579 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 RASGRF2O14827 1237 aa11.8□□□□□ -0.52
LRRFIP1-211ENST00000478958 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms