RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 EFCAB12Q6NXP0 572 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 KCNV1Q6PIU1 500 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 GPR142Q7Z601 462 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 VPS36Q86VN1 386 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 RNF10Q8N5U6 811 aaKnown RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 CEP112Q8N8E3 955 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 SLC30A5Q8TAD4 765 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 OLIG1Q8TAK6 271 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 CAGE1Q8TC20 777 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 AFAP1L1Q8TED9 768 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 ATP8B4Q8TF62 1192 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 PSPC1Q8WXF1 523 aaKnown RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 GOLGA1Q92805 767 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 ALS2CR12Q96Q35 445 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 FNBP1Q96RU3 617 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 PNKPQ96T60 521 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 MSTO1Q9BUK6 570 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 INO80BQ9C086 356 aaPredicted RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 PLEKHA4Q9H4M7 779 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 ANKZF1Q9H8Y5 726 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 LUC7LQ9NQ29 371 aaKnown RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 SUCLA2Q9P2R7 463 aaPredicted RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 ZC3H4Q9UPT8 1303 aaKnown RBP4.46□□□□□ -1.7
USP25-208ENST00000478932 GINS2Q9Y248 185 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 LOXHD1Q8IVV2 1947 aa4.46□□□□□ -1.7
USP25-208ENST00000478932 ANO9A1A5B4 782 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 ASB14A6NK59 587 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 ADCY6O43306 1168 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 EXTL3O43909 919 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 ITGBL1O95965 494 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 CST3P01034 146 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 H2AFZP0C0S5 128 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 GARTP22102 1010 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 RFC5P40937 340 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 ZNF157P51786 506 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 CBX1P83916 185 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 ARHGAP1Q07960 439 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 GRM1Q13255 1194 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 BIRC3Q13489 604 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TUBB2AQ13885 445 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 C2CD6Q53TS8 623 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 MAMDC4Q6UXC1 1216 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 H2AFVQ71UI9 128 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 PLPPR4Q7Z2D5 763 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 MTERF4Q7Z6M4 381 aaKnown RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 THNSL1Q8IYQ7 743 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 CEP120Q8N960 986 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SHCBP1Q8NEM2 672 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 OR5B17Q8NGF7 314 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SLC35G2Q8TBE7 412 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 HELQQ8TDG4 1101 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 HDAC7Q8WUI4 952 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 HVCN1Q96D96 273 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 OSBPL9Q96SU4 736 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SYT11Q9BT88 431 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TUBB2BQ9BVA1 445 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 THAP2Q9H0W7 228 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SMARCAD1Q9H4L7 1026 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TMEM8AQ9HCN3 771 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 RBAKQ9NYW8 714 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 ERAP1Q9NZ08 941 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 COQ4Q9Y3A0 265 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 PDE4DIPQ5VU43 2346 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 H3BRB1 525 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP25-208ENST00000478932 MAPK13O15264 365 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 P4HA2O15460 535 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 LGR5O75473 907 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TOM1L1O75674 476 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 VTNP04004 478 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 PYGBP11216 843 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SSTR3P32745 418 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 COPB2P35606 906 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 GCLCP48506 637 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 GPC3P51654 580 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 MXD4Q14582 209 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 MAPK6Q16659 721 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 IER5Q5VY09 327 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TDRD10Q5VZ19 366 aaKnown RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 DAAM2Q86T65 1068 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 USP37Q86T82 979 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 NOP9Q86U38 636 aaKnown RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 FAM71AQ8IYT1 594 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SPATA4Q8NEY3 305 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 TMC2Q8TDI7 906 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 EPS8L1Q8TE68 723 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 MORC4Q8TE76 937 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 SHC3Q92529 594 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 LENG1Q96BZ8 264 aaPredicted RBP4.45□□□□□ -1.7
USP25-208ENST00000478932 MAML3Q96JK9 1138 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 GDAP1L1Q96MZ0 367 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 MAP7D2Q96T17 732 aa4.45□□□□□ -1.7
USP25-208ENST00000478932 PCDHB18PQ96TA0 734 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms