RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SPATA24Q86W54 205 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 SEMA6BQ9H3T3 888 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 DHX35Q9H5Z1 703 aaKnown RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 WNT10BO00744 389 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 RHBDL3P58872 404 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 THOC5Q13769 683 aaKnown RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 SGSM1Q2NKQ1 1148 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 IER5Q5VY09 327 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 SRRM1Q8IYB3 904 aaKnown RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 RYBPQ8N488 228 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 ZNF560Q96MR9 790 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 RIC1Q4ADV7 1423 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 A0A087X0T9 212 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 CREB3O43889 395 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 KRT37O76014 449 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 FAM228BP0C875 321 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 VEGFAP15692 232 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 IRX4P78413 519 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 EPC2Q52LR7 807 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 EFCAB12Q6NXP0 572 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 TRIM42Q8IWZ5 723 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 SKA2Q8WVK7 121 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
NPHP4-208ENST00000478423 PDCD2LQ9BRP1 358 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 SMARCAL1Q9NZC9 954 aa15.1■□□□□ 0.01
NPHP4-208ENST00000478423 RASA4BC9J798 803 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 PLSCR1O15162 318 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 RASA4O43374 803 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 HBP1O60381 514 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 TCF7P36402 384 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-208ENST00000478423 PMS2P54278 862 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 HUNKP57058 714 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 RBP5P82980 135 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 MMS22LQ6ZRQ5 1243 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 LMNTD2Q8IXW0 634 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 CFAP61Q8NHU2 1237 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 TBX20Q9UMR3 447 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-208ENST00000478423 MAGOHP61326 146 aaKnown RBP15.09■□□□□ 0.01
NPHP4-208ENST00000478423 RCN2Q14257 317 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 KYAT1Q16773 422 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 NYAP1Q6ZVC0 841 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 SYTL5Q8TDW5 730 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-208ENST00000478423 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 C17orf75Q9HAS0 396 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 ASAP2O43150 1006 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 ERVK-24P63145 666 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 CAV1Q03135 178 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 PLCB4Q15147 1175 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 ATF7IP2Q5U623 682 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 RAB3IPQ96QF0 476 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-208ENST00000478423 CYP26B1Q9NR63 512 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 IQANK1A0A1B0GTG1 560 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 PIK3R2O00459 728 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 CTSHP09668 335 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 PSMC6P62333 389 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 CDKAL1Q5VV42 579 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 SCFD1Q8WVM8 642 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 FBXL5Q9UKA1 691 aa15.09■□□□□ 0.01
NPHP4-208ENST00000478423 TARSL2A2RTX5 802 aaKnown RBP15.08■□□□□ 0.01
NPHP4-208ENST00000478423 TXNDC9O14530 226 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 P4HA2O15460 535 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 GRIN3BO60391 1043 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 KRT14P02533 472 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 TMEM132DQ14C87 1099 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 TRIM65Q6PJ69 517 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 CBWD2Q8IUF1 395 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 TEX2Q8IWB9 1127 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 KLHL29Q96CT2 875 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 HDAC11Q96DB2 347 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 CBWD1Q9BRT8 395 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 VCX3BQ9H321 246 aa15.08■□□□□ 0.01
NPHP4-208ENST00000478423 RRP15Q9Y3B9 282 aaKnown RBP15.08■□□□□ 0.01
NPHP4-208ENST00000478423 WEE2P0C1S8 567 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 ZC3H18Q86VM9 953 aaKnown RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 NOA1Q8NC60 698 aaKnown RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 KLHL11Q9NVR0 708 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 CHORDC1Q9UHD1 332 aaPredicted RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 TOM1L1O75674 476 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 MMEP08473 750 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 HVCN1Q96D96 273 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 PRMT7Q9NVM4 692 aaPredicted RBP15.08■□□□□ 0
NPHP4-208ENST00000478423 NAGPAQ9UK23 515 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 ALG6Q9Y672 507 aa15.08■□□□□ 0
NPHP4-208ENST00000478423 TTI1O43156 1089 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 CETPP11597 493 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 RGS7P49802 495 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 NME3Q13232 169 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 DEPDC1BQ8WUY9 529 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 A0A087X0B3 334 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 EXTL3O43909 919 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 PDGFRAP16234 1089 aa15.07■□□□□ 0
NPHP4-208ENST00000478423 XPAP23025 273 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms