RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 TDP2O95551 362 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 C8AP07357 584 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 POU2F2P09086 479 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 RFC5P40937 340 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 NRLP54845 237 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 ADCY1Q08828 1119 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 ADCK5Q3MIX3 580 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 RTP2Q5QGT7 225 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 FERMT3Q86UX7 667 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 HACE1Q8IYU2 909 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 GSTCDQ8NEC7 633 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 ETNPPLQ8TBG4 499 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 PIK3R5Q8WYR1 880 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 CPB2Q96IY4 423 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 APOL6Q9BWW8 343 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 VPS54Q9P1Q0 977 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 KCNH3Q9ULD8 1083 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 POLIQ9UNA4 740 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 NOTCH4Q99466 2003 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 SF3B1O75533 1304 aaKnown RBP eCLIP11.8□□□□□ -0.525e-11■■■■■ 34.5
APTX-222ENST00000478279 EML1O00423 815 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 LRP3O75074 770 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 ECI2O75521 394 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 TDGF1P13385 188 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 NLRP5P59047 1200 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 PTENP60484 403 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 FGD1P98174 961 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 GRIK3Q13003 919 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 MTAPQ13126 283 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 KRT32Q14532 448 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 LAIR1Q6GTX8 287 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 CELF5Q8N6W0 485 aaKnown RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 LNX1Q8TBB1 728 aaPredicted RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 TTPALQ9BTX7 342 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 TRIM6Q9C030 488 aaPredicted RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 BMP2KQ9NSY1 1161 aaPredicted RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.79□□□□□ -0.52
APTX-222ENST00000478279 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 NID2Q14112 1375 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
APTX-222ENST00000478279 ANKRD11Q6UB99 2663 aaPredicted RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 FRYQ5TBA9 3013 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 SHISA7A6NL88 538 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 INO80B-WBP1J3KQ70 363 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 RETP07949 1114 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 HMGB1P09429 215 aaKnown RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 AKAP5P24588 427 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 POU5F1BQ06416 359 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PPP2R5DQ14738 602 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 EMC2Q15006 297 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 NTRK3Q16288 839 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PSMD5Q16401 504 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 LPAL2Q16609 132 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 AMHR2Q16671 573 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PABPC1LQ4VXU2 614 aaKnown RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 FAM171A1Q5VUB5 890 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 SLC7A14Q8TBB6 771 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 PLA2G2FQ9BZM2 168 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 CHRDQ9H2X0 955 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 NXF3Q9H4D5 531 aaKnown RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 HEBP1Q9NRV9 189 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 GDE1Q9NZC3 331 aa11.78□□□□□ -0.52
APTX-222ENST00000478279 WRAP73Q9P2S5 460 aaPredicted RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 DNMT3BQ9UBC3 853 aaKnown RBP11.78□□□□□ -0.52
APTX-222ENST00000478279 ASPMQ8IZT6 3477 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 MAN2B1O00754 1011 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 ADAM12O43184 909 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 IFNAR1P17181 557 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 ARF4P18085 180 aaPredicted RBP11.77□□□□□ -0.53
APTX-222ENST00000478279 RAB33AQ14088 237 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.53
APTX-222ENST00000478279 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
APTX-222ENST00000478279 PDXDC1Q6P996 788 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 RTL10Q7L3V2 364 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 OTUD6AQ7L8S5 288 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 CEP57Q86XR8 500 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 C4orf19Q8IY42 314 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 DNASE1L2Q92874 299 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 MCRS1Q96EZ8 462 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 SLC26A6Q9BXS9 759 aa11.77□□□□□ -0.53
APTX-222ENST00000478279 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms