RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CDH22Q9UJ99 828 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 LZTS1Q9Y250 596 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 GDAQ9Y2T3 454 aa9.14□□□□□ -0.95
ERCC8-205ENST00000477893 FAM86C2PA6NEL3 165 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 C2orf71A6NGG8 1288 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 CASTOR2A6NHX0 329 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SFI1A8K8P3 1242 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 K7ELQ4 463 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 NRP1O14786 923 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 N4BP3O15049 544 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 CXCL14O95715 111 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 PLA2G4BP0C869 781 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SRGAP2BP0DMP2 458 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 MYBP10242 640 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 MUTP22033 750 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 NPTX2P47972 431 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 COPS2P61201 443 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 OSTNP61366 133 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 POU5F1BQ06416 359 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 DMP1Q13316 513 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SMAD4Q13485 552 aaKnown RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SF3A1Q15459 793 aaKnown RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 PUS10Q3MIT2 529 aaKnown RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 EEF1DP3Q658K8 133 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 RINT1Q6NUQ1 792 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 BRAPQ7Z569 592 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 ZBTB33Q86T24 672 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 FAM178BQ8IXR5 827 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 GJD3Q8N144 294 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 HASPINQ8TF76 798 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 B3GALT6Q96L58 329 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 ZBP1Q9H171 429 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 EPHX3Q9H6B9 360 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 NGRNQ9NPE2 291 aaKnown RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 UBN1Q9NPG3 1134 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 MIOSQ9NXC5 875 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 FAM50BQ9Y247 325 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 FAN1Q9Y2M0 1017 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 USP15Q9Y4E8 981 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-205ENST00000477893 CLIC4Q9Y696 253 aa9.13□□□□□ -0.95
ERCC8-205ENST00000477893 A0A1B0GUA9 196 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ACKR2O00590 384 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 SLC16A4O15374 487 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 CLASP2O75122 1294 aaKnown RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 RECQL4O94761 1208 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 PDCP20941 246 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 SYT1P21579 422 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 MARCKSP29966 332 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 UBA7P41226 1012 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ZP2Q05996 745 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 RESTQ13127 1097 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 GLRA4Q5JXX5 417 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 NT5DC1Q5TFE4 455 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ATF7IP2Q5U623 682 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 PDE12Q6L8Q7 609 aaKnown RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 DDX53Q86TM3 631 aaKnown RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 HSCBQ8IWL3 235 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 COLGALT2Q8IYK4 626 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 DAW1Q8N136 415 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 MSLNLQ96KJ4 702 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 DRC1Q96MC2 740 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 CDCA3Q99618 268 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 CXCL16Q9H2A7 254 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 FZD8Q9H461 694 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ZHX3Q9H4I2 956 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 KMT5AQ9NQR1 393 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 MARCH5Q9NX47 278 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 GIT1Q9Y2X7 761 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
ERCC8-205ENST00000477893 PHLPP2Q6ZVD8 1323 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 K7ERI5 159 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 NR1I2O75469 434 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 ALDH2P05091 517 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 KRT18P05783 430 aaKnown RBP9.11□□□□□ -0.95
ERCC8-205ENST00000477893 URODP06132 367 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 HSP90AA1P07900 732 aaKnown RBP9.11□□□□□ -0.95
ERCC8-205ENST00000477893 EPCAMP16422 314 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 PLCG1P19174 1290 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 EFNA5P52803 228 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 MAPK7Q13164 816 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 BMS1Q14692 1282 aaKnown RBP9.11□□□□□ -0.95
ERCC8-205ENST00000477893 PTPN14Q15678 1187 aa9.11□□□□□ -0.95
ERCC8-205ENST00000477893 SMAD2Q15796 467 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms