RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ST3GAL2Q16842 350 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 Q6ZUG5 572 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 CPB2Q96IY4 423 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 KXD1Q9BQD3 176 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 PHF20Q9BVI0 1012 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 DDX25Q9UHL0 483 aaKnown RBP22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 USP18Q9UMW8 372 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 PCDHA4Q9UN74 947 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 DCDC2BA2VCK2 349 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 C8AP07357 584 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 ADRB1P08588 477 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 POU2F2P09086 479 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 TARSP26639 723 aaKnown RBP22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 PTENP60484 403 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 PPM1LQ5SGD2 360 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 IFNLR1Q8IU57 520 aaPredicted RBP22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 ITFG1Q8TB96 612 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 FAM126AQ9BYI3 521 aaPredicted RBP22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 TRIM6Q9C030 488 aaPredicted RBP22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 PARD6AQ9NPB6 346 aa22.55■■□□□ 1.2
PDLIM1-202ENST00000477757 M0R2N6 131 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 SLC37A4O43826 429 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 XYLBO75191 536 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 P4HBP07237 508 aaKnown RBP22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 NCBP1Q09161 790 aaKnown RBP22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 HSP90AA2PQ14568 343 aaPredicted RBP22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 AMHR2Q16671 573 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 TPRG1Q6ZUI0 275 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 NPAS3Q8IXF0 933 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 PIK3R5Q8WYR1 880 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 RABGGTAQ92696 567 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 NELL2Q99435 816 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 CLSTN3Q9BQT9 956 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 GMEB2Q9UKD1 530 aa22.54■■□□□ 1.2
PDLIM1-202ENST00000477757 CCL16O15467 120 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 TADA2AO75478 443 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 YWHABP31946 246 aaKnown RBP22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 MBTD1Q05BQ5 628 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 MXD4Q14582 209 aaPredicted RBP22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 TSSK4Q6SA08 328 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 C4orf19Q8IY42 314 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 FBXL16Q8N461 479 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 LXNQ9BS40 222 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 TTPALQ9BTX7 342 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 KCNMB3Q9NPA1 279 aa22.53■■□□□ 1.2
PDLIM1-202ENST00000477757 INO80B-WBP1J3KQ70 363 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 NCAM2O15394 837 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 ARF4P18085 180 aaPredicted RBP22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 AKAP5P24588 427 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 PSMD5Q16401 504 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 BLIDQ8IZY5 108 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 DAGLBQ8NCG7 672 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 FAM20AQ96MK3 541 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 MTRQ99707 1265 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 PAAF1Q9BRP4 392 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 AGXT2Q9BYV1 514 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 CACNG4Q9UBN1 327 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 KCNH3Q9ULD8 1083 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 POLIQ9UNA4 740 aa22.52■■□□□ 1.2
PDLIM1-202ENST00000477757 POU5F1BQ06416 359 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 FZD5Q13467 585 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 TFDP1Q14186 410 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 NPY5RQ15761 445 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 ZNF852Q6ZMS4 543 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 OTUD6AQ7L8S5 288 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 LNX1Q8TBB1 728 aaPredicted RBP22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 SLC7A14Q8TBB6 771 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 XPNPEP1Q9NQW7 623 aa22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 MRPS17Q9Y2R5 130 aaKnown RBP22.51■■□□□ 1.19
PDLIM1-202ENST00000477757 NOTCH4Q99466 2003 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 ECI2O75521 394 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 KIF4AO95239 1232 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 TDGF1P13385 188 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 MTAPQ13126 283 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 TUSC3Q13454 348 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 CAPSQ13938 189 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 PABPC1LQ4VXU2 614 aaKnown RBP22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 XKR9Q5GH70 373 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 SLC27A1Q6PCB7 646 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 HASPINQ8TF76 798 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 NFKBIZQ9BYH8 718 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 NCOA5Q9HCD5 579 aaKnown RBP22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 HCFC1R1Q9NWW0 138 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 KLK14Q9P0G3 267 aa22.5■■□□□ 1.19
PDLIM1-202ENST00000477757 SHISA7A6NL88 538 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 ADAM12O43184 909 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 B4GALT5O43286 388 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 NPTXRO95502 500 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 ADCY1Q08828 1119 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 EPHA7Q15375 998 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 INF2Q27J81 1249 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 BMP2KLQ5H9B9 411 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 FAM171A1Q5VUB5 890 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 PDXDC1Q6P996 788 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 TRIM22Q8IYM9 498 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 NETO1Q8TDF5 533 aa22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 JAKMIP1Q96N16 626 aaKnown RBP22.49■■□□□ 1.19
PDLIM1-202ENST00000477757 ELAVL2Q12926 359 aaKnown RBP22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 PPM1JQ5JR12 505 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms