RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ABLIM1O14639 778 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 BRD1O95696 1058 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 THP07101 528 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 SSTR3P32745 418 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-211ENST00000477612 SMTNP53814 917 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 TUSC3Q13454 348 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 LLGL2Q6P1M3 1020 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 FAM173BQ6P4H8 233 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 PPFIBP1Q86W92 1011 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 TMEM161BQ8NDZ6 487 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 KLHL5Q96PQ7 755 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 EPHX3Q9H6B9 360 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 MRPL17Q9NRX2 175 aaKnown RBP23.9■■□□□ 1.42
COL9A3-211ENST00000477612 CHST7Q9NS84 486 aa23.9■■□□□ 1.42
COL9A3-211ENST00000477612 FBXO2Q9UK22 296 aaPredicted RBP23.9■■□□□ 1.42
COL9A3-211ENST00000477612 SLC16A4O15374 487 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 PLCG1P19174 1290 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 RAD51AP2Q09MP3 1159 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 KARSQ15046 597 aaKnown RBP23.89■■□□□ 1.41
COL9A3-211ENST00000477612 KIAA0319Q5VV43 1072 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 TAS1R1Q7RTX1 841 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 RAD54LQ92698 747 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 TARS2Q9BW92 718 aaKnown RBP23.89■■□□□ 1.41
COL9A3-211ENST00000477612 C1QTNF1Q9BXJ1 281 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 CDT1Q9H211 546 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 CXCL16Q9H2A7 254 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 FOXD4L1Q9NU39 408 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 LARSQ9P2J5 1176 aaKnown RBP23.89■■□□□ 1.41
COL9A3-211ENST00000477612 PLXNA3P51805 1871 aa23.89■■□□□ 1.41
COL9A3-211ENST00000477612 CNPP09543 421 aaKnown RBP23.88■■□□□ 1.41
COL9A3-211ENST00000477612 MAPTP10636 758 aaKnown RBP23.88■■□□□ 1.41
COL9A3-211ENST00000477612 PDIA4P13667 645 aaKnown RBP23.88■■□□□ 1.41
COL9A3-211ENST00000477612 CA8P35219 290 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 DDIT3P35638 169 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 GRM5P41594 1212 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 ZNF131P52739 623 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 NCKAP1LP55160 1127 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 DSG1Q02413 1049 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 CBX2Q14781 532 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-211ENST00000477612 TPRNQ4KMQ1 711 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 XKR4Q5GH76 650 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 USP28Q96RU2 1077 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 PHF7Q9BWX1 381 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-211ENST00000477612 EMILIN2Q9BXX0 1053 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 RXFP1Q9HBX9 757 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 ADAM28Q9UKQ2 775 aa23.88■■□□□ 1.41
COL9A3-211ENST00000477612 VWA8A3KMH1 1905 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 NPHP3-ACAD11A0A0J9YXS1 232 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 LOC730098B7Z3J9 87 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 F8W810 466 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 H0YCG3 227 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 URODP06132 367 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 SCP2P22307 547 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 MARCKSP29966 332 aaPredicted RBP23.87■■□□□ 1.41
COL9A3-211ENST00000477612 ITIH3Q06033 890 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 SLC39A14Q15043 492 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 FUT10Q6P4F1 479 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 ALKAL1Q6UXT8 129 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 USP49Q70CQ1 688 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 GPBP1Q86WP2 473 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 TMEM87AQ8NBN3 555 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 LARP4BQ92615 738 aaKnown RBP23.87■■□□□ 1.41
COL9A3-211ENST00000477612 EPSTI1Q96J88 318 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 REEP2Q9BRK0 252 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 PAAF1Q9BRP4 392 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 GPR62Q9BZJ7 368 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 ADAM7Q9H2U9 754 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 DZANK1Q9NVP4 752 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 GDAQ9Y2T3 454 aa23.87■■□□□ 1.41
COL9A3-211ENST00000477612 C1RP00736 705 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 MCF2P10911 925 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 EPCAMP16422 314 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 GLUD2P49448 558 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 CLCN4P51793 760 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 STRN3Q13033 797 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 MCM6Q14566 821 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 HSP90AA2PQ14568 343 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-211ENST00000477612 ZNF568Q3ZCX4 644 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 MPZL3Q6UWV2 235 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 ZPBP2Q6X784 338 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 CEP120Q8N960 986 aa23.86■■□□□ 1.41
COL9A3-211ENST00000477612 PPP1R10Q96QC0 940 aaKnown RBP23.86■■□□□ 1.41
COL9A3-211ENST00000477612 TOM1L1O75674 476 aa23.85■■□□□ 1.41
COL9A3-211ENST00000477612 ALADP13716 330 aa23.85■■□□□ 1.41
COL9A3-211ENST00000477612 NASPP49321 788 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-211ENST00000477612 CACNB1Q02641 598 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-211ENST00000477612 USP41Q3LFD5 358 aa23.85■■□□□ 1.41
COL9A3-211ENST00000477612 HSCBQ8IWL3 235 aa23.85■■□□□ 1.41
COL9A3-211ENST00000477612 CCDC94Q9BW85 323 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-211ENST00000477612 C2orf16Q68DN1 1984 aa23.85■■□□□ 1.41
COL9A3-211ENST00000477612 DENND4AQ7Z401 1863 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 GPR37L1O60883 481 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 TADA2AO75478 443 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 KLRC2P26717 231 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 SPECC1Q5M775 1068 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 HAUS6Q7Z4H7 955 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 ZBTB45Q96K62 511 aaPredicted RBP23.84■■□□□ 1.41
COL9A3-211ENST00000477612 CLIC6Q96NY7 704 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 PARVGQ9HBI0 331 aa23.84■■□□□ 1.41
COL9A3-211ENST00000477612 TOPORSQ9NS56 1045 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms