RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HES2Q9Y543 173 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 STYXL1Q9Y6J8 313 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 TRIM49BA6NDI0 452 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 CLIC2O15247 247 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 OGTO15294 1046 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 ADSSP30520 456 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 CYP2J2P51589 502 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 OSTNP61366 133 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 ZCWPW2Q504Y3 356 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 NPAS4Q8IUM7 802 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 LPPQ93052 612 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 SAAL1Q96ER3 474 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 DHTKD1Q96HY7 919 aaPredicted RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 ASB2Q96Q27 587 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 SLC9A7Q96T83 725 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 ANO10Q9NW15 660 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 TMEM161AQ9NX61 479 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 HSPBP1Q9NZL4 362 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 AGO2Q9UKV8 859 aaKnown RBP16.71■□□□□ 0.27
SEC13-215ENST00000477547 TRAF3IP3Q9Y228 551 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 MYO9BQ13459 2157 aa16.71■□□□□ 0.27
SEC13-215ENST00000477547 FAM189A1O60320 539 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ZNF623O75123 536 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 RECQL4O94761 1208 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 NR3C1P04150 777 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ITGA4P13612 1032 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 CCNE1P24864 410 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PBX2P40425 430 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 GRM5P41594 1212 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 LRRC63Q05C16 580 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 RASIP1Q5U651 963 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ATXN2LQ8WWM7 1075 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 THEGQ9P2T0 379 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 GOLGA8IPA6NC78 632 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 GOLGA8JA6NMD2 632 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 MEIS3P2A8K0S8 358 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 GRXCR1A8MXD5 290 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 UPP2O95045 317 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 FGFR1P11362 822 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 NR2F2P24468 414 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 TNFSF9P41273 254 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PMS1P54277 932 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 STX17P56962 302 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 CCDC85BQ15834 202 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 KYAT1Q16773 422 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 TMCO2Q7Z6W1 182 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 MRPL10Q7Z7H8 261 aaKnown RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 GPD1LQ8N335 351 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
SEC13-215ENST00000477547 RSAD1Q9HA92 442 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 SNTG2Q9NY99 539 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
SEC13-215ENST00000477547 EOMESO95936 686 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 CXCL8P10145 99 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
SEC13-215ENST00000477547 AKAP5P24588 427 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 MLH1P40692 756 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 ACOT2P49753 483 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 YARSP54577 528 aaKnown RBP16.69■□□□□ 0.26
SEC13-215ENST00000477547 FAM189BP81408 668 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 NFIL3Q16649 462 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 ABI1Q8IZP0 508 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 XXYLT1Q8NBI6 393 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 ZSWIM2Q8NEG5 633 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 GAS2L1Q99501 681 aaPredicted RBP16.69■□□□□ 0.26
SEC13-215ENST00000477547 FAM213AQ9BRX8 229 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 DNAJC25Q9H1X3 360 aa16.69■□□□□ 0.26
SEC13-215ENST00000477547 TOPORSQ9NS56 1045 aaPredicted RBP16.69■□□□□ 0.26
SEC13-215ENST00000477547 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms