RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 LINC01465Q8N7H1 131 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 ZNF713Q8N859 430 aaPredicted RBP11.67□□□□□ -0.54
TRAIP-206ENST00000477546 SCLT1Q96NL6 688 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 NCOA5Q9HCD5 579 aaKnown RBP11.67□□□□□ -0.54
TRAIP-206ENST00000477546 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 PDRG1Q9NUG6 133 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 FAM105AQ9NUU6 356 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
TRAIP-206ENST00000477546 PRG3Q9Y2Y8 225 aaPredicted RBP11.67□□□□□ -0.54
TRAIP-206ENST00000477546 V9GY48 417 aaPredicted RBP11.67□□□□□ -0.54
TRAIP-206ENST00000477546 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 SEC24BO95487 1268 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 POU2F2P09086 479 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
TRAIP-206ENST00000477546 GPC3P51654 580 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ADCY7P51828 1080 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ANAPC15P60006 121 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 CCT2P78371 535 aaKnown RBP11.66□□□□□ -0.54
TRAIP-206ENST00000477546 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
TRAIP-206ENST00000477546 CREMQ03060 361 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 LRRC32Q14392 662 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ELSPBP1Q96BH3 223 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ZNF668Q96K58 619 aaPredicted RBP11.66□□□□□ -0.54
TRAIP-206ENST00000477546 TRPV5Q9NQA5 729 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 ZNF302Q9NR11 478 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 GDE1Q9NZC3 331 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 CEP131Q9UPN4 1083 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 PIAS3Q9Y6X2 628 aa11.66□□□□□ -0.54
TRAIP-206ENST00000477546 EVPLQ92817 2033 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 CCDC163A0A0D9SF12 145 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 LNP1A1A4G5 178 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 FAM221BA6H8Z2 402 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 CPLX1O14810 134 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 CCNE2O96020 404 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 ATP4AP20648 1035 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 EVCP57679 992 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 STK3Q13188 491 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 ITGB3BPQ13352 177 aaPredicted RBP11.65□□□□□ -0.54
TRAIP-206ENST00000477546 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
TRAIP-206ENST00000477546 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 EFCAB12Q6NXP0 572 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 GLYCTKQ8IVS8 523 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 IRF7Q92985 503 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 ZC3H10Q96K80 434 aaKnown RBP11.65□□□□□ -0.54
TRAIP-206ENST00000477546 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
TRAIP-206ENST00000477546 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 BARHL2Q9NY43 387 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 POLIQ9UNA4 740 aa11.65□□□□□ -0.54
TRAIP-206ENST00000477546 CCL16O15467 120 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 CSDE1O75534 798 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 AKAP3O75969 853 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 C8AP07357 584 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 PABPC1LQ4VXU2 614 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 TANGO2Q6ICL3 276 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 AGMOQ6ZNB7 445 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 Q6ZS52 159 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 LRRC71Q8N4P6 559 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 ING5Q8WYH8 240 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 MSANTD3Q96H12 275 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 LRIG1Q96JA1 1093 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 MXRA8Q9BRK3 442 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 TRMT61BQ9BVS5 477 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 RNF26Q9BY78 433 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 ZNF334Q9HCZ1 680 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 TMEM9BQ9NQ34 198 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 C2orf42Q9NWW7 574 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 MTCL1Q9Y4B5 1905 aaKnown RBP11.64□□□□□ -0.55
TRAIP-206ENST00000477546 DOCK6Q96HP0 2047 aa11.64□□□□□ -0.55
TRAIP-206ENST00000477546 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 LAMA5O15230 3695 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
TRAIP-206ENST00000477546 C1QL1O75973 258 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 POMCP01189 267 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 IFNAR1P17181 557 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
TRAIP-206ENST00000477546 CCNE1P24864 410 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 OR1G1P47890 313 aa11.63□□□□□ -0.55
TRAIP-206ENST00000477546 MLLT6P55198 1093 aaPredicted RBP11.63□□□□□ -0.55
TRAIP-206ENST00000477546 SCAPQ12770 1279 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms