RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 URI1O94763 535 aaPredicted RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 CELF2O95319 508 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 GH1P01241 217 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TXNP10599 105 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 ATP4AP20648 1035 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 SOX5P35711 763 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 MAGEA1P43355 309 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 MXI1P50539 228 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 CYP2J2P51589 502 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 CDC42EP1Q00587 391 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ITIH3Q06033 890 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 CKAP4Q07065 602 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 KLHL30Q0D2K2 578 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TRIM32Q13049 653 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 RAPGEF1Q13905 1077 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PCBP1Q15365 356 aaKnown RBP eCLIP7.23□□□□□ -1.25
LDB3-206ENST00000477489 SURF1Q15526 300 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 SNRNP35Q16560 246 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 KYAT1Q16773 422 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 MTERF2Q49AM1 385 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 EPC2Q52LR7 807 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TDRD12Q587J7 1177 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 ZNF569Q5MCW4 686 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PAPD7Q5XG87 772 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 CDCA2Q69YH5 1023 aaPredicted RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 KRT39Q6A163 491 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 IQCEQ6IPM2 695 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PPP1R2P3Q6NXS1 205 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ARMCX2Q7L311 632 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PLEKHH3Q7Z736 793 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ZBTB8OSQ8IWT0 167 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PDCL2Q8N4E4 241 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ACRBPQ8NEB7 543 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 MNS1Q8NEH6 495 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PPTC7Q8NI37 304 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 DEPTORQ8TB45 409 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PSPC1Q8WXF1 523 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 SECISBP2LQ93073 1101 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 FAXDC2Q96IV6 333 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PCYT2Q99447 389 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ABHD16BQ9H3Z7 469 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TMEM8AQ9HCN3 771 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 SIX2Q9NPC8 291 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 LZTFL1Q9NQ48 299 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TOR4AQ9NXH8 423 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 RNF14Q9UBS8 474 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 CDC23Q9UJX2 597 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ZNF215Q9UL58 517 aaPredicted RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 JRKLQ9Y4A0 524 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ADGRA2Q96PE1 1338 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 A0A0U1RQG5 324 aaPredicted RBP7.22□□□□□ -1.25
LDB3-206ENST00000477489 F8VZ95 297 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 K7ERI5 159 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 TLR2O60603 784 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 JUNDP17535 347 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 SLC9A1P19634 815 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GLRA2P23416 452 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 ADORA2AP29274 412 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 ADSSP30520 456 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 MAP2K2P36507 400 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 LIG4P49917 911 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GPC3P51654 580 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GCNT1Q02742 428 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 CYP24A1Q07973 514 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 PSMD6Q15008 389 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 TCEAL1Q15170 157 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 NAB2Q15742 525 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 IQSEC1Q6DN90 963 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 MAEAQ7L5Y9 396 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 IRF2BP2Q7Z5L9 587 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GPR142Q7Z601 462 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 RETREG3Q86VR2 466 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 CYP4X1Q8N118 509 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 PARD3BQ8TEW8 1205 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 POMGNT1Q8WZA1 660 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 ANKRD7Q92527 254 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GLG1Q92896 1179 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 HHIPL1Q96JK4 782 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 SPATA33Q96N06 139 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 NOX5Q96PH1 765 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 WDR24Q96S15 920 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 CBWD1Q9BRT8 395 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 CRACR2AQ9BSW2 395 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
LDB3-206ENST00000477489 INTS2Q9H0H0 1204 aaKnown RBP7.22□□□□□ -1.25
LDB3-206ENST00000477489 FAM124BQ9H5Z6 455 aaPredicted RBP7.22□□□□□ -1.25
LDB3-206ENST00000477489 NLRC4Q9NPP4 1024 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 GPRC5CQ9NQ84 441 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 NENFQ9UMX5 172 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 Q9Y3F1 56 aa7.22□□□□□ -1.25
LDB3-206ENST00000477489 A0A0B4J269 797 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 CES2O00748 559 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 TOM1L1O75674 476 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ARIH2O95376 493 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 PGK2P07205 417 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 CYP2C8P10632 490 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 TCP1P17987 556 aaKnown RBP7.21□□□□□ -1.26
LDB3-206ENST00000477489 TMOD1P28289 359 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms