RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 CWF19L1Q69YN2 538 aaKnown RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 PALB2Q86YC2 1186 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 RIN2Q8WYP3 895 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 SMG7Q92540 1137 aaKnown RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 STAMQ92783 540 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 ZNF707Q96C28 371 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
HDLBP-236ENST00000477477 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 ZDHHC7Q9NXF8 308 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 IGSF9Q9P2J2 1179 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
HDLBP-236ENST00000477477 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 ACKR2O00590 384 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 RECQL4O94761 1208 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 KIF4AO95239 1232 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 EDN1P05305 212 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 SPATA31D3P0C874 917 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 MUTP22033 750 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 GBP2P32456 591 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-236ENST00000477477 PRPF4BQ13523 1007 aaKnown RBP12.55□□□□□ -0.4
HDLBP-236ENST00000477477 PPP2R5AQ15172 486 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 TTC38Q5R3I4 469 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 SPATA31D4Q6ZUB0 917 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 GLYCTKQ8IVS8 523 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 FLCNQ8NFG4 579 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 MYADMQ96S97 322 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 ADPGKQ9BRR6 497 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 NT5C3AQ9H0P0 336 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
HDLBP-236ENST00000477477 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 MYO10Q9HD67 2058 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 ST18O60284 1047 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 GFRA3O60609 400 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 THP07101 528 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 RPL17P18621 184 aaKnown RBP12.54□□□□□ -0.4
HDLBP-236ENST00000477477 LIG1P18858 919 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
HDLBP-236ENST00000477477 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.47e-11■□□□□ 10.2
HDLBP-236ENST00000477477 HMGN5P82970 282 aaKnown RBP12.54□□□□□ -0.4
HDLBP-236ENST00000477477 NAB2Q15742 525 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 ECM1Q16610 540 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 DCAF4L1Q3SXM0 396 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PRSS55Q6UWB4 352 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-236ENST00000477477 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PRKD2Q9BZL6 878 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PIDD1Q9HB75 910 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 FBXL21Q9UKT6 434 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
HDLBP-236ENST00000477477 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
HDLBP-236ENST00000477477 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 ZMYND10O75800 440 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 NPR3P17342 541 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 AOC1P19801 751 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 NBR1Q14596 966 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 SIX5Q8N196 739 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 C4orf32Q8N8J7 132 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 RSAD2Q8WXG1 361 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 NXPE3Q969Y0 559 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 IFT74Q96LB3 600 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 TTPALQ9BTX7 342 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 CXCL16Q9H2A7 254 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 FBXW11Q9UKB1 542 aa12.53□□□□□ -0.4
HDLBP-236ENST00000477477 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 ZFHX2Q9C0A1 2572 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-236ENST00000477477 EFNA5P52803 228 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
HDLBP-236ENST00000477477 PSMD5Q16401 504 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 FAM171A1Q5VUB5 890 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 GET4Q7L5D6 327 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-236ENST00000477477 SLC44A3Q8N4M1 653 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-236ENST00000477477 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.41
HDLBP-236ENST00000477477 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-236ENST00000477477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms