RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	NRP1	O14786	923 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	GAP43	P17677	238 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	SCP2	P22307	547 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	GTF2F1	P35269	517 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	TFF2	Q03403	129 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	HYAL1	Q12794	435 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	NOLC1	Q14978	699 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	PLPP4	Q5VZY2	271 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	MICAL1	Q8TDZ2	1067 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	TCF25	Q9BQ70	676 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	HAPLN2	Q9GZV7	340 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	ST6GALNAC4	Q9H4F1	302 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	GDPD2	Q9HCC8	539 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	TBC1D7	Q9P0N9	293 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	SEL1L	Q9UBV2	794 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	KCNH3	Q9ULD8	1083 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	FAN1	Q9Y2M0	1017 aa		27.79	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	HNRNPDL	O14979	420 aa	Known RBP	27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	ALDH2	P05091	517 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	OR1G1	P47890	313 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	ADAL	Q6DHV7	355 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	ZNF720	Q7Z2F6	126 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	MAP4K3	Q8IVH8	894 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	HLA-C	Q95604	372 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	CCDC94	Q9BW85	323 aa	Predicted RBP	27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	VN1R3	Q9BXE9	311 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	TRIM9	Q9C026	710 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	ENTPD7	Q9NQZ7	604 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	PANK4	Q9NVE7	773 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	MARCH5	Q9NX47	278 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	CACNG4	Q9UBN1	327 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	VCAN	P13611	3396 aa		27.78	■■■□□ 2.04
ARHGEF3-208	ENST00000477440		F8W810	466 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	PPP1R37	O75864	691 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	PIGR	P01833	764 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	PFKFB1	P16118	471 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	LIG4	P49917	911 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	MCL1	Q07820	350 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	SEZ6	Q53EL9	994 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	GLRA4	Q5JXX5	417 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	UBE2Z	Q9H832	354 aa	Predicted RBP	27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	MRPL44	Q9H9J2	332 aa	Known RBP	27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440	COG5	Q9UP83	839 aa		27.77	■■■□□ 2.04
ARHGEF3-208	ENST00000477440		A0A1B0GVL5	298 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CLDN3	O15551	220 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CMA1	P23946	247 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	MATR3	P43243	847 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	COL19A1	Q14993	1142 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	NAB2	Q15742	525 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PDE12	Q6L8Q7	609 aa	Known RBP	27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	SLC39A4	Q6P5W5	647 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TMC7	Q7Z402	723 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	DDX53	Q86TM3	631 aa	Known RBP	27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	RBM23	Q86U06	439 aa	Known RBP	27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	STRA6	Q9BX79	667 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	FGFBP2	Q9BYJ0	223 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	LRRC27	Q9C0I9	530 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	IGFLR1	Q9H665	355 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	MAGEF1	Q9HAY2	307 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	OLFML3	Q9NRN5	406 aa		27.76	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	HIDE1	A8MVS5	230 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TH	P07101	528 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ABCD1	P33897	745 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	NRIP1	P48552	1158 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CASP5	P51878	434 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	COASY	Q13057	564 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TPRN	Q4KMQ1	711 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	VPS52	Q8N1B4	723 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ATXN2L	Q8WWM7	1075 aa	Known RBP	27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	RABGGTA	Q92696	567 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PPP2R3C	Q969Q6	453 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PABPC5	Q96DU9	382 aa	Known RBP	27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PAAF1	Q9BRP4	392 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ZBP1	Q9H171	429 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	IKZF4	Q9H2S9	585 aa		27.75	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	LINC01565	O15544	149 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	MEFV	O15553	781 aa	Predicted RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CASP1	P29466	404 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	YARS	P54577	528 aa	Known RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ASIC1	P78348	528 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	AMPD3	Q01432	767 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TUSC3	Q13454	348 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CCDC65	Q8IXS2	484 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	HVCN1	Q96D96	273 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	SNX27	Q96L92	541 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ACAP3	Q96P50	834 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	PYM1	Q9BRP8	204 aa	Known RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	NGRN	Q9NPE2	291 aa	Known RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CLDND1	Q9NY35	253 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	SERTAD1	Q9UHV2	236 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	HPSE	Q9Y251	543 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ANK1	P16157	1881 aa		27.74	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TCF20	Q9UGU0	1960 aa	Known RBP	27.73	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	27.73	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	CASTOR2	A6NHX0	329 aa		27.73	■■■□□ 2.03
ARHGEF3-208	ENST00000477440	TISP43	B9A030	160 aa		27.73	■■■□□ 2.03

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