RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 SUSD6Q92537 303 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 RABGGTAQ92696 567 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 ZBTB45Q96K62 511 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-209ENST00000477377 REEP2Q9BRK0 252 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 CDT1Q9H211 546 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 PRG3Q9Y2Y8 225 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-209ENST00000477377 A0A087X0B3 334 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 SOD2P04179 222 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 KIAA0319Q5VV43 1072 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 GPBP1Q86WP2 473 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 GPR62Q9BZJ7 368 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 CHST7Q9NS84 486 aa17.1■□□□□ 0.33
COMMD6-209ENST00000477377 BDP1A6H8Y1 2624 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 GRM5P41594 1212 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
COMMD6-209ENST00000477377 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 ADHFE1Q8IWW8 467 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 GJD3Q8N144 294 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
COMMD6-209ENST00000477377 KLHL5Q96PQ7 755 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
COMMD6-209ENST00000477377 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
COMMD6-209ENST00000477377 EPHX3Q9H6B9 360 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 PRKAG3Q9UGI9 489 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 GDAQ9Y2T3 454 aa17.09■□□□□ 0.33
COMMD6-209ENST00000477377 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
COMMD6-209ENST00000477377 MYH11P35749 1972 aa17.08■□□□□ 0.33
COMMD6-209ENST00000477377 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
COMMD6-209ENST00000477377 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.08■□□□□ 0.32
COMMD6-209ENST00000477377 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
COMMD6-209ENST00000477377 TUSC3Q13454 348 aa17.08■□□□□ 0.32
COMMD6-209ENST00000477377 TFIP11Q9UBB9 837 aaKnown RBP17.08■□□□□ 0.32
COMMD6-209ENST00000477377 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
COMMD6-209ENST00000477377 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
COMMD6-209ENST00000477377 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 THP07101 528 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 EPCAMP16422 314 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 CLCN4P51793 760 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 DSG1Q02413 1049 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 MPZL3Q6UWV2 235 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 ZBTB33Q86T24 672 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 KRI1Q8N9T8 703 aaKnown RBP17.07■□□□□ 0.32
COMMD6-209ENST00000477377 CASP10Q92851 521 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 B3GALT6Q96L58 329 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
COMMD6-209ENST00000477377 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 RXFP1Q9HBX9 757 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
COMMD6-209ENST00000477377 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 KCNG1Q9UIX4 513 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
COMMD6-209ENST00000477377 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 KIF4AO95239 1232 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
COMMD6-209ENST00000477377 MCF2P10911 925 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 SMTNP53814 917 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 OSTNP61366 133 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
COMMD6-209ENST00000477377 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
COMMD6-209ENST00000477377 ZNF568Q3ZCX4 644 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
COMMD6-209ENST00000477377 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 ZPBP2Q6X784 338 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
COMMD6-209ENST00000477377 DNAJC19Q96DA6 116 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 RPS6KC1Q96S38 1066 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 APOL5Q9BWW9 433 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 ADAM28Q9UKQ2 775 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 FAM50BQ9Y247 325 aa17.06■□□□□ 0.32
COMMD6-209ENST00000477377 MYMKA6NI61 221 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 LOC730098B7Z3J9 87 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 TEX28O15482 410 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 TRAK2O60296 914 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 FAM189A1O60320 539 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 PPP6R2O75170 966 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 TOM1L1O75674 476 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 F13A1P00488 732 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 PIGRP01833 764 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 HOXB8P17481 243 aaPredicted RBP17.05■□□□□ 0.32
COMMD6-209ENST00000477377 MCL1Q07820 350 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 CBX2Q14781 532 aaPredicted RBP17.05■□□□□ 0.32
COMMD6-209ENST00000477377 SLC10A6Q3KNW5 377 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 SEZ6Q53EL9 994 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms