RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 H7C1D1 291 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 SEC24DO94855 1032 aaPredicted RBP3.94□□□□□ -1.78
XRN1-211ENST00000477237 SLC9A1P19634 815 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 RBM25P49756 843 aaKnown RBP3.94□□□□□ -1.78
XRN1-211ENST00000477237 FOXG1P55316 489 aaPredicted RBP3.94□□□□□ -1.78
XRN1-211ENST00000477237 RHOT2Q8IXI1 618 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 CHST14Q8NCH0 376 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 FERMT2Q96AC1 680 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 RNF31Q96EP0 1072 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 PHACTR3Q96KR7 559 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 TIMP4Q99727 224 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 ZSWIM1Q9BR11 485 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 CPNE5Q9HCH3 593 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 TMEM74BQ9NUR3 256 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 PCDHB6Q9Y5E3 794 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 ZNF521Q96K83 1311 aa3.94□□□□□ -1.78
XRN1-211ENST00000477237 A0A1W2PR48 441 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 PTPDC1A2A3K4 754 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 GLRX3O76003 335 aaKnown RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 PRKCGP05129 697 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 EXOSC10Q01780 885 aaKnown RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 KLF9Q13886 244 aaPredicted RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 UBE3CQ15386 1083 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 ZNF174Q15697 407 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 LONRF2Q1L5Z9 754 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 ZNF626Q68DY1 528 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 DDX53Q86TM3 631 aaKnown RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 VGLL2Q8N8G2 317 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 RTF1Q92541 710 aaKnown RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 SARAFQ96BY9 339 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 CEP95Q96GE4 821 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 CDC5LQ99459 802 aaKnown RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 ELF4Q99607 663 aaPredicted RBP3.93□□□□□ -1.78
XRN1-211ENST00000477237 SAMD15Q9P1V8 674 aa3.93□□□□□ -1.78
XRN1-211ENST00000477237 ELL2O00472 640 aaPredicted RBP3.92□□□□□ -1.78
XRN1-211ENST00000477237 GPD1P21695 349 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 RANGAP1P46060 587 aaPredicted RBP3.92□□□□□ -1.78
XRN1-211ENST00000477237 CXADRP78310 365 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 ETFDHQ16134 617 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 TSHZ3Q63HK5 1081 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 CDYL2Q8N8U2 506 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 ZFP28Q8NHY6 868 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 MDM1Q8TC05 714 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 NACC2Q96BF6 587 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 BOD1Q96IK1 185 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 GALNT9Q9HCQ5 603 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 KCTD5Q9NXV2 234 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 SIRPGQ9P1W8 387 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 ENTPD2Q9Y5L3 495 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 CACNA1IQ9P0X4 2223 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 AOX1Q06278 1338 aa3.92□□□□□ -1.78
XRN1-211ENST00000477237 CCDC78A2IDD5 438 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 KCNQ2O43526 872 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 PRR35P0CG20 571 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 WT1P19544 449 aaPredicted RBP3.91□□□□□ -1.78
XRN1-211ENST00000477237 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 TKTP29401 623 aaKnown RBP3.91□□□□□ -1.78
XRN1-211ENST00000477237 MGAT5Q09328 741 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 ZC3H12BQ5HYM0 836 aaKnown RBP3.91□□□□□ -1.78
XRN1-211ENST00000477237 TECPR1Q7Z6L1 1165 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 HOMEZQ8IX15 550 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 SLC35B2Q8TB61 432 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 ZNF428Q96B54 188 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 DNAJC7Q99615 494 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 TRIM39Q9HCM9 518 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 CABP5Q9NP86 173 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 MTMR4Q9NYA4 1195 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 FLRT1Q9NZU1 646 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 USP18Q9UMW8 372 aa3.91□□□□□ -1.78
XRN1-211ENST00000477237 A0A1B0GTW7 788 aa3.9□□□□□ -1.79
XRN1-211ENST00000477237 FAM221BA6H8Z2 402 aa3.9□□□□□ -1.79
XRN1-211ENST00000477237 EIF5BO60841 1220 aaKnown RBP3.9□□□□□ -1.79
XRN1-211ENST00000477237 CCT4P50991 539 aaKnown RBP3.9□□□□□ -1.79
XRN1-211ENST00000477237 MFSD14BQ5SR56 506 aa3.9□□□□□ -1.79
XRN1-211ENST00000477237 RPL36ALQ969Q0 106 aaKnown RBP3.9□□□□□ -1.79
XRN1-211ENST00000477237 PTCD3Q96EY7 689 aaKnown RBP3.9□□□□□ -1.79
XRN1-211ENST00000477237 DEPDC7Q96QD5 511 aa3.9□□□□□ -1.79
XRN1-211ENST00000477237 MRPL4Q9BYD3 311 aaKnown RBP3.9□□□□□ -1.79
XRN1-211ENST00000477237 TOMM22Q9NS69 142 aa3.9□□□□□ -1.79
XRN1-211ENST00000477237 H3BNC9 293 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 OPA1O60313 960 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 MOSPD3O75425 235 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 ITGA10O75578 1167 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 PFKMP08237 780 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 ATP2B1P20020 1258 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 GTF2F1P35269 517 aaKnown RBP eCLIP3.89□□□□□ -1.79
XRN1-211ENST00000477237 ATXN7L2Q5T6C5 722 aaPredicted RBP3.89□□□□□ -1.79
XRN1-211ENST00000477237 CREB3L3Q68CJ9 461 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 ZCCHC8Q6NZY4 707 aaKnown RBP3.89□□□□□ -1.79
XRN1-211ENST00000477237 LNX2Q8N448 690 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 GAB3Q8WWW8 586 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 ARMC5Q96C12 935 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 ZMAT4Q9H898 229 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 UNKLQ9H9P5 680 aaKnown RBP3.89□□□□□ -1.79
XRN1-211ENST00000477237 DMTF1Q9Y222 760 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 BTBD3Q9Y2F9 522 aa3.89□□□□□ -1.79
XRN1-211ENST00000477237 PRR23D1E9PI22 279 aaPredicted RBP3.88□□□□□ -1.79
XRN1-211ENST00000477237 RAPGEF3O95398 923 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms