RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	SNTG2	Q9NY99	539 aa		11.21	□□□□□ -0.61
CCM2-208	ENST00000476594	MTMR6	Q9Y217	621 aa		11.21	□□□□□ -0.61
CCM2-208	ENST00000476594	PCDHGC5	Q9Y5F6	944 aa		11.21	□□□□□ -0.61
CCM2-208	ENST00000476594	SRPRB	Q9Y5M8	271 aa	Known RBP	11.21	□□□□□ -0.61
CCM2-208	ENST00000476594	ATG2A	Q2TAZ0	1938 aa		11.21	□□□□□ -0.62
CCM2-208	ENST00000476594	BDP1	A6H8Y1	2624 aa		11.21	□□□□□ -0.62
CCM2-208	ENST00000476594	TDRD15	B5MCY1	1934 aa	Known RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	SLC16A4	O15374	487 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	TADA2A	O75478	443 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	TOM1L1	O75674	476 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	PLCG1	P19174	1290 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	KLRC2	P26717	231 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	MARCKS	P29966	332 aa	Predicted RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	GRM5	P41594	1212 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	DLX2	Q07687	328 aa	Predicted RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	RAD51AP2	Q09MP3	1159 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	MAPK7	Q13164	816 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	DHX8	Q14562	1220 aa	Known RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	KARS	Q15046	597 aa	Known RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	PTPN14	Q15678	1187 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	USP41	Q3LFD5	358 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	RRAGB	Q5VZM2	374 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	ANKRD54	Q6NXT1	300 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	LLGL2	Q6P1M3	1020 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	MPZL3	Q6UWV2	235 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	ZPBP2	Q6X784	338 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	CCDC73	Q6ZRK6	1079 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	TMEM173	Q86WV6	379 aa	Predicted RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	DAW1	Q8N136	415 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	MYCT1	Q8N699	235 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	RIPOR3	Q96MK2	946 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	NECAB3	Q96P71	396 aa	Predicted RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	ACO2	Q99798	780 aa	Known RBP	11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	LRRC27	Q9C0I9	530 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	KLK14	Q9P0G3	267 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	CLEC1B	Q9P126	229 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	ADAM28	Q9UKQ2	775 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	GDA	Q9Y2T3	454 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	HCFC2	Q9Y5Z7	792 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	CLIC4	Q9Y696	253 aa		11.2	□□□□□ -0.62
CCM2-208	ENST00000476594	SFI1	A8K8P3	1242 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594		K7ENM7	598 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	CLDN3	O15551	220 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	TRAPPC3	O43617	180 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	CLASP2	O75122	1294 aa	Known RBP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	GLP2R	O95838	553 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	C1R	P00736	705 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	DDIT3	P35638	169 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	MTHFR	P42898	656 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	LIG4	P49917	911 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	NCKAP1L	P55160	1127 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	CEBPZ	Q03701	1054 aa	Known RBP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	ZP2	Q05996	745 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	SLC39A14	Q15043	492 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	PTPA	Q15257	358 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	NT5DC1	Q5TFE4	455 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	EEF1DP3	Q658K8	133 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	ATL3	Q6DD88	541 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	FUT10	Q6P4F1	479 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	SV2B	Q7L1I2	683 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	TMEM161B	Q8NDZ6	487 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	ACAP3	Q96P50	834 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	TARS2	Q9BW92	718 aa	Known RBP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	PHF7	Q9BWX1	381 aa	Predicted RBP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	CDT1	Q9H211	546 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	ZHX3	Q9H4I2	956 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	POLD4	Q9HCU8	107 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	ANKFY1	Q9P2R3	1169 aa		11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	USP15	Q9Y4E8	981 aa	Predicted RBP	11.19	□□□□□ -0.62
CCM2-208	ENST00000476594	HNRNPDL	O14979	420 aa	Known RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	XPOT	O43592	962 aa	Known RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	TRAK2	O60296	914 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	PPP6R2	O75170	966 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	YEATS4	O95619	227 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	BRD1	O95696	1058 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	GLUD1	P00367	558 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	MAPT	P10636	758 aa	Known RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	STAT6	P42226	847 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	NASP	P49321	788 aa	Predicted RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	AFF1	P51825	1210 aa	Known RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	DSG1	Q02413	1049 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	KCNC3	Q14003	757 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	MCM6	Q14566	821 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	CBX2	Q14781	532 aa	Predicted RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	HAUS6	Q7Z4H7	955 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	KCNN1	Q92952	543 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	DDX27	Q96GQ7	796 aa	Known RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	USP28	Q96RU2	1077 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	REEP2	Q9BRK0	252 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	SFXN1	Q9H9B4	322 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	MARCH5	Q9NX47	278 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	MIOS	Q9NXC5	875 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	SEL1L	Q9UBV2	794 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	FBXO2	Q9UK22	296 aa	Predicted RBP	11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	CFAP45	Q9UL16	551 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	NR2E1	Q9Y466	385 aa		11.18	□□□□□ -0.62
CCM2-208	ENST00000476594	MYH11	P35749	1972 aa		11.17	□□□□□ -0.62

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