RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 NPTXRO95502 500 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 ERBB2P04626 1255 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 CT47B1P0C2W7 299 aaPredicted RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 DDIT3P35638 169 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 GBX1Q14549 363 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 CRY1Q16526 586 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 CCDC96Q2M329 555 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 NAIF1Q69YI7 327 aaPredicted RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 OLFML1Q6UWY5 402 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 TPH2Q8IWU9 490 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 SUGP1Q8IWZ8 645 aaKnown RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 EXOC2Q96KP1 924 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 DHRS4Q9BTZ2 278 aa6.94□□□□□ -1.3
NUP58-209ENST00000476553 MORC2Q9Y6X9 1032 aaPredicted RBP6.94□□□□□ -1.3
NUP58-209ENST00000476553 FAM83GA6ND36 823 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 GOLGA6L6A8MZA4 724 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 B3GALT2O43825 422 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 CLK3P49761 638 aaKnown RBP6.93□□□□□ -1.3
NUP58-209ENST00000476553 BPIFB4P59827 614 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
NUP58-209ENST00000476553 BIRC3Q13489 604 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 STRIP1Q5VSL9 837 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 FSTL4Q6MZW2 842 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 KCNV1Q6PIU1 500 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 BHLHA9Q7RTU4 235 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 CREBRFQ8IUR6 639 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 ANKRD53Q8N9V6 530 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 BEND2Q8NDZ0 799 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 TTC17Q96AE7 1141 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 MRPL4Q9BYD3 311 aaKnown RBP6.93□□□□□ -1.3
NUP58-209ENST00000476553 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 TCF7L1Q9HCS4 588 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 IL23AQ9NPF7 189 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 PGAP2Q9UHJ9 254 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 PNMA8BQ9ULN7 279 aaPredicted RBP6.93□□□□□ -1.3
NUP58-209ENST00000476553 FRMD4BQ9Y2L6 1034 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 LUC7L2Q9Y383 392 aaKnown RBP6.93□□□□□ -1.3
NUP58-209ENST00000476553 COX11Q9Y6N1 276 aa6.93□□□□□ -1.3
NUP58-209ENST00000476553 UBE2QL1A1L167 161 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 PRAMEF22A3QJZ6 481 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 C2orf78A6NCI8 922 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 HIP1RO75146 1068 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 H2AFYO75367 372 aaKnown RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 POU3F2P20265 443 aaPredicted RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 ZFP36P26651 326 aaKnown RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 STK3Q13188 491 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 LONRF1Q17RB8 773 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 GET4Q7L5D6 327 aaPredicted RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 KRT77Q7Z794 578 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 GFM2Q969S9 779 aaKnown RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 RPL10LQ96L21 214 aaKnown RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 NLRC4Q9NPP4 1024 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 EVLQ9UI08 416 aaPredicted RBP6.92□□□□□ -1.3
NUP58-209ENST00000476553 HDAC9Q9UKV0 1011 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 PHTF1Q9UMS5 762 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
NUP58-209ENST00000476553 CCDC66A2RUB6 948 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 PRSS47A8MTI9 375 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 ERC2O15083 957 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 TERF1P54274 439 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 JAKMIP3Q5VZ66 844 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 TTLL5Q6EMB2 1281 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 MFSD5Q6N075 450 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 HIPK4Q8NE63 616 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 MDGA1Q8NFP4 955 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 PTPRN2Q92932 1015 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 GCDHQ92947 438 aaPredicted RBP6.91□□□□□ -1.3
NUP58-209ENST00000476553 PGBD4Q96DM1 585 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 TCF25Q9BQ70 676 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 R3HDMLQ9H3Y0 253 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 MAN1C1Q9NR34 630 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 KCNH7Q9NS40 1196 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 KLHL11Q9NVR0 708 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 FAM50BQ9Y247 325 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 RBM8AQ9Y5S9 174 aaKnown RBP6.91□□□□□ -1.3
NUP58-209ENST00000476553 DGKBQ9Y6T7 804 aa6.91□□□□□ -1.3
NUP58-209ENST00000476553 FOXP2O15409 715 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 CDK4P11802 303 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 RRM1P23921 792 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 SDHAP31040 664 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 RENBPP51606 427 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 GPSM2P81274 684 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 TMPRSS15P98073 1019 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
NUP58-209ENST00000476553 GRM3Q14832 879 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 PCBP1Q15365 356 aaKnown RBP eCLIP6.9□□□□□ -1.3
NUP58-209ENST00000476553 PTPN21Q16825 1174 aa6.9□□□□□ -1.3
NUP58-209ENST00000476553 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms