RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 POLIQ9UNA4 740 aa5.48□□□□□ -1.53
USP4-209ENST00000475873 INVSQ9Y283 1065 aa5.48□□□□□ -1.53
USP4-209ENST00000475873 PCDHB15Q9Y5E8 787 aa5.48□□□□□ -1.53
USP4-209ENST00000475873 TSC2P49815 1807 aa5.48□□□□□ -1.53
USP4-209ENST00000475873 HELZP42694 1942 aaKnown RBP5.47□□□□□ -1.53
USP4-209ENST00000475873 MYBPHLA2RUH7 354 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 TRIM6-TRIM34B2RNG4 842 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 KLRF2D3W0D1 207 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 MAP3K13O43283 966 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ZNF623O75123 536 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 MOSPD3O75425 235 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ALDH2P05091 517 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 POU2F2P09086 479 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
USP4-209ENST00000475873 FTH1P19P0C7X4 201 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 CD59P13987 128 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 BCKDHBP21953 392 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 CTHP32929 405 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ABCG1P45844 678 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 CAMK2BQ13554 666 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 MTMR1Q13613 665 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 LRRC32Q14392 662 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 PON2Q15165 354 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ALX1Q15699 326 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ZNF423Q2M1K9 1284 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 PRSS36Q5K4E3 855 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 PPM1LQ5SGD2 360 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ELMSAN1Q6PJG2 1045 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ABHD15Q6UXT9 468 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SLCO6A1Q86UG4 719 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 NLRX1Q86UT6 975 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 DGKHQ86XP1 1220 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 HOMEZQ8IX15 550 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SCUBE3Q8IX30 993 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 METTL13Q8N6R0 699 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 DAGLBQ8NCG7 672 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 LSM14AQ8ND56 463 aaKnown RBP5.47□□□□□ -1.53
USP4-209ENST00000475873 TTC8Q8TAM2 541 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SLC7A14Q8TBB6 771 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SPATA18Q8TC71 538 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 RABGGTAQ92696 567 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 IRF7Q92985 503 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 LRRC3BQ96PB8 259 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SLC32A1Q9H598 525 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 AZI2Q9H6S1 392 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 ECHDC1Q9NTX5 307 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 TMEM74BQ9NUR3 256 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 MIOSQ9NXC5 875 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 GDE1Q9NZC3 331 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SRPK3Q9UPE1 567 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 MRPS23Q9Y3D9 190 aaKnown RBP5.47□□□□□ -1.53
USP4-209ENST00000475873 ITPR2Q14571 2701 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 POLQO75417 2590 aa5.47□□□□□ -1.53
USP4-209ENST00000475873 SPTBN1Q01082 2364 aaKnown RBP5.47□□□□□ -1.53
USP4-209ENST00000475873 ZFHX3Q15911 3703 aa5.46□□□□□ -1.53
USP4-209ENST00000475873 KNL1Q8NG31 2342 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 MYH9P35579 1960 aaKnown RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 WDR27A2RRH5 827 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 CARNS1A5YM72 827 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 PALM3A6NDB9 673 aaPredicted RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 SPECC1L-ADORA2AF8WAN1 911 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 NTRK1P04629 796 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 ENGP17813 658 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 PSMC3P17980 439 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 IGFBP6P24592 240 aaPredicted RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 OR1G1P47890 313 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 ELF2Q15723 593 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 ZNF484Q5JVG2 852 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 DGKKQ5KSL6 1271 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 UBXN11Q5T124 520 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 TWF2Q6IBS0 349 aaKnown RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 PDXDC2PQ6P474 469 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 FUT10Q6P4F1 479 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 TRMT1LQ7Z2T5 733 aaKnown RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 MRPL10Q7Z7H8 261 aaKnown RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 TMC8Q8IU68 726 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 DCBLD2Q96PD2 775 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 RIOX1Q9H6W3 641 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 ZFP14Q9HCL3 533 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 KCNH7Q9NS40 1196 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 SNTG2Q9NY99 539 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 DACT1Q9NYF0 836 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 STK39Q9UEW8 545 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 EVLQ9UI08 416 aaPredicted RBP5.46□□□□□ -1.54
USP4-209ENST00000475873 AKT3Q9Y243 479 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 SSX2IPQ9Y2D8 614 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 NBASA2RRP1 2371 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 NFASCO94856 1347 aa5.46□□□□□ -1.54
USP4-209ENST00000475873 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
USP4-209ENST00000475873 MYO16Q9Y6X6 1858 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 TDRD15B5MCY1 1934 aaKnown RBP5.45□□□□□ -1.54
USP4-209ENST00000475873 ANTXRLA6NF34 631 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 TRABD2BA6NFA1 517 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 TULP1O00294 542 aaPredicted RBP5.45□□□□□ -1.54
USP4-209ENST00000475873 PIK3CDO00329 1044 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 TLX3O43711 291 aaPredicted RBP5.45□□□□□ -1.54
USP4-209ENST00000475873 RAB11FIP3O75154 756 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 XYLBO75191 536 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 SLC26A2P50443 739 aa5.45□□□□□ -1.54
USP4-209ENST00000475873 MLLT6P55198 1093 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms