RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZNF75DP51815 510 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ERVK-21P61565 698 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 WDR5P61964 334 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 KCNC4Q03721 635 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 MAPK7Q13164 816 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TRIM14Q14142 442 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 MFSD10Q14728 455 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 NR1I3Q14994 352 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 PTGISQ16647 500 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 UGCGQ16739 394 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TSR1Q2NL82 804 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 LEXMQ3ZCV2 418 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 EFCAB12Q6NXP0 572 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TAF2Q6P1X5 1199 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ZPBP2Q6X784 338 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ZNF410Q86VK4 478 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ZC3H3Q8IXZ2 948 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 GJD3Q8N144 294 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 PDLIM2Q96JY6 352 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TGS1Q96RS0 853 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 RAD9AQ99638 391 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 EDEM3Q9BZQ6 932 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 KCTD10Q9H3F6 313 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 UBE2ZQ9H832 354 aaPredicted RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 CD320Q9NPF0 282 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 SUCLA2Q9P2R7 463 aaPredicted RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TBX20Q9UMR3 447 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 CTNND2Q9UQB3 1225 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 MAPK8IP1Q9UQF2 711 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 TCHHQ07283 1943 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 NPHP3-ACAD11A0A0J9YXS1 232 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 A0A1B0GTH6 734 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 KCNJ18B7U540 433 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 K7ENM7 598 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 HAS3O00219 553 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 P4HA2O15460 535 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PRPF6O94906 941 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 GJB5O95377 273 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 F2P00734 622 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PTMAP06454 111 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 KRT13P13646 458 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SELPP16109 830 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SFPQP23246 707 aaKnown RBP eCLIP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 KLRC1P26715 233 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PHKA2P46019 1235 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 MTIF2P46199 727 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 AP3M2P53677 418 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 STX17P56962 302 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PPFIA1Q13136 1202 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 IKBKEQ14164 716 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 KCNJ12Q14500 433 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SURF1Q15526 300 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 MAPK6Q16659 721 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 MAN2A1Q16706 1144 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PUS10Q3MIT2 529 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 ZCWPW2Q504Y3 356 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 CNKSR3Q6P9H4 555 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 MTHFD1LQ6UB35 978 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 INTS8Q75QN2 995 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 LRRC8DQ7L1W4 858 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SRGAP1Q7Z6B7 1085 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SESTD1Q86VW0 696 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 DAW1Q8N136 415 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 C7orf31Q8N865 590 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 XXYLT1Q8NBI6 393 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 TMEM161BQ8NDZ6 487 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 ZNF397Q8NF99 534 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 GDPD5Q8WTR4 605 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PRPF31Q8WWY3 499 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 COPS5Q92905 334 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 FAM81BQ96LP2 452 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PRIMPOLQ96LW4 560 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 FIZ1Q96SL8 496 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 CEP89Q96ST8 783 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 TUBGCP2Q9BSJ2 902 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 POLR3FQ9H1D9 316 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 NUCKS1Q9H1E3 243 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 KCNH6Q9H252 994 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 RNPEPQ9H4A4 650 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 BCAS3Q9H6U6 928 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SUGCTQ9HAC7 445 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 SAMSN1Q9NSI8 373 aaKnown RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 PRMT7Q9NVM4 692 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 DMAC2Q9NW81 257 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 ARHGAP28Q9P2N2 729 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 ARMCX3Q9UH62 379 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-207ENST00000475558 TANC1Q9C0D5 1861 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 LCTP09848 1927 aa7.66□□□□□ -1.18
SHQ1-207ENST00000475558 C17orf102A2RUQ5 167 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 LINC01553A4QN01 128 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 ACKR2O00590 384 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms