RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZBTB42B2RXF5 422 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 CYP26A1O43174 497 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 FKBP1BP68106 108 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 CLDN10P78369 228 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 LAMTOR4Q0VGL1 99 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 LMBRD2Q68DH5 695 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 CRELD2Q6UXH1 353 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 RFFLQ8WZ73 363 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 TATDN2Q93075 761 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 GOLPH3Q9H4A6 298 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 PDE11AQ9HCR9 933 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 FAM53CQ9NYF3 392 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 IVNS1ABPQ9Y6Y0 642 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 NCANO14594 1321 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ZC3H11AO75152 810 aaKnown RBP eCLIP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 KIF4AO95239 1232 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 C15orf39Q6ZRI6 1047 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 PEX26Q7Z412 305 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ANKRD23Q86SG2 305 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ZBTB8OSQ8IWT0 167 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 EPS8L1Q8TE68 723 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 PI4K2AQ9BTU6 479 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ABCB6Q9NP58 842 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 C1orf112Q9NSG2 853 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 FAM170AA1A519 330 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 CLDN3O15551 220 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 STRNO43815 780 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 HBP1O60381 514 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 EDN1P05305 212 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 HARSP12081 509 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 BIRC3Q13489 604 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 WDR44Q5JSH3 913 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 BEND6Q5SZJ8 279 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 TAF3Q5VWG9 929 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 NOP9Q86U38 636 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 SLC47A2Q86VL8 602 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 RNF149Q8NC42 400 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ELMO3Q96BJ8 720 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 FAM84AQ96KN4 292 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 OSGEPQ9NPF4 335 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 IGKV6-21A0A0C4DH24 114 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 KCNK3O14649 394 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 FTLP02792 175 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 WNT7BP56706 349 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ZACNQ401N2 412 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ENOSF1Q7L5Y1 443 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 TRAPPC12Q8WVT3 735 aa16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 SUCLA2Q9P2R7 463 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 NOCTQ9UK39 431 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-215ENST00000475470 ADGRA2Q96PE1 1338 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 PIK3CAP42336 1068 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 GCNT1Q02742 428 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 MAPK6Q16659 721 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 PTPROQ16827 1216 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 CDCA2Q69YH5 1023 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ABRAQ8N0Z2 381 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 FUT8Q9BYC5 575 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 C2orf40Q9H1Z8 148 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 MORF4L1Q9UBU8 362 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 CES2O00748 559 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 MSCO60682 206 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 PDE6CP51160 858 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 TDRD10Q5VZ19 366 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ISCUQ9H1K1 167 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 ACP6Q9NPH0 428 aa16.55■□□□□ 0.24
RPUSD3-215ENST00000475470 PLXNB2O15031 1838 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 RTN2O75298 545 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 TOM1L1O75674 476 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 SASH3O75995 380 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 GH1P01241 217 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 HLA-DRAP01903 254 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms