RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 PEX3P56589 373 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 MAPK7Q13164 816 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 CBX2Q14781 532 aaPredicted RBP13.49□□□□□ -0.25
SSR1-205ENST00000475213 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 BRAPQ7Z569 592 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 RNF168Q8IYW5 571 aaPredicted RBP13.49□□□□□ -0.25
SSR1-205ENST00000475213 SLC22A17Q8WUG5 538 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 KLHL5Q96PQ7 755 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 RPS6KC1Q96S38 1066 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 PLIN2Q99541 437 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 EMILIN2Q9BXX0 1053 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 NT5C3AQ9H0P0 336 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 MRPL17Q9NRX2 175 aaKnown RBP13.49□□□□□ -0.25
SSR1-205ENST00000475213 MUTYHQ9UIF7 546 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 CDH22Q9UJ99 828 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 CITO14578 2027 aa13.49□□□□□ -0.25
SSR1-205ENST00000475213 MTCL1Q9Y4B5 1905 aaKnown RBP13.49□□□□□ -0.25
SSR1-205ENST00000475213 C2CD2LO14523 706 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 RECQL4O94761 1208 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 URODP06132 367 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
SSR1-205ENST00000475213 GUCY2CP25092 1073 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 ITIH3Q06033 890 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 DMP1Q13316 513 aaPredicted RBP13.48□□□□□ -0.25
SSR1-205ENST00000475213 DCAF4L1Q3SXM0 396 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
SSR1-205ENST00000475213 ATF7IP2Q5U623 682 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CES5AQ6NT32 575 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 TAS1R3Q7RTX0 852 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CABP7Q86V35 215 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 C12orf76Q8N812 135 aaPredicted RBP13.48□□□□□ -0.25
SSR1-205ENST00000475213 SYT2Q8N9I0 419 aaPredicted RBP13.48□□□□□ -0.25
SSR1-205ENST00000475213 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 COLEC11Q9BWP8 271 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 ADAM7Q9H2U9 754 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 TMEM134Q9H6X4 195 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 ARHGAP28Q9P2N2 729 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 C2orf16Q68DN1 1984 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 TECTAO75443 2155 aa13.48□□□□□ -0.25
SSR1-205ENST00000475213 PHLPP2Q6ZVD8 1323 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
SSR1-205ENST00000475213 SFI1A8K8P3 1242 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 PTGESO14684 152 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 PLA2G4BP0C869 781 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 KLRC2P26717 231 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 GLUD2P49448 558 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 CLCN4P51793 760 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 SLC12A3P55017 1021 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 RAD51AP2Q09MP3 1159 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 TUSC3Q13454 348 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 TMEM119Q4V9L6 283 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
SSR1-205ENST00000475213 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 AK8Q96MA6 479 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 ACO2Q99798 780 aaKnown RBP13.47□□□□□ -0.25
SSR1-205ENST00000475213 PAAF1Q9BRP4 392 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 GPR62Q9BZJ7 368 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 C17orf75Q9HAS0 396 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 KMT5AQ9NQR1 393 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 SSX2IPQ9Y2D8 614 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
SSR1-205ENST00000475213 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 SLC16A4O15374 487 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 BMP15O95972 392 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 THP07101 528 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 PDCP20941 246 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 DSG1Q02413 1049 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 GRIN1Q05586 938 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
SSR1-205ENST00000475213 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.25
SSR1-205ENST00000475213 NAB2Q15742 525 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 FUT10Q6P4F1 479 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 B3GALT6Q96L58 329 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 NECTIN4Q96NY8 510 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 MRPL4Q9BYD3 311 aaKnown RBP13.46□□□□□ -0.25
SSR1-205ENST00000475213 POMKQ9H5K3 350 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 CHST7Q9NS84 486 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.25
SSR1-205ENST00000475213 RBM19Q9Y4C8 960 aaKnown RBP13.46□□□□□ -0.25
SSR1-205ENST00000475213 VWA8A3KMH1 1905 aa13.46□□□□□ -0.25
SSR1-205ENST00000475213 DENND4AQ7Z401 1863 aa13.46□□□□□ -0.26
SSR1-205ENST00000475213 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms