RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 IRAK3Q9Y616 596 aa18.06■□□□□ 0.48
ATG4B-216ENST00000475195 TBCAO75347 108 aaKnown RBP18.05■□□□□ 0.48
ATG4B-216ENST00000475195 RECQL4O94761 1208 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 GAP43P17677 238 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 NUCB2P80303 420 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 ZNF568Q3ZCX4 644 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 ADGRD2Q7Z7M1 963 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
ATG4B-216ENST00000475195 MICAL1Q8TDZ2 1067 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 PPP2R3CQ969Q6 453 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 TCHPQ9BT92 498 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 CXCL16Q9H2A7 254 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 UBE2ZQ9H832 354 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-216ENST00000475195 OLFML3Q9NRN5 406 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 VCANP13611 3396 aa18.05■□□□□ 0.48
ATG4B-216ENST00000475195 TCHHQ07283 1943 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CLDN3O15551 220 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 PPP1R37O75864 691 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 THP07101 528 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 BMP1P13497 986 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CMA1P23946 247 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 NMT1P30419 496 aaKnown RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 LTBRP36941 435 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 AMPD3Q01432 767 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 TFF2Q03403 129 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 KCNC3Q14003 757 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 MAP4K3Q8IVH8 894 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 RNF168Q8IYW5 571 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 EFHBQ8N7U6 833 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CEP120Q8N960 986 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CHAMP1Q96JM3 812 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CDCA3Q99618 268 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 TCF25Q9BQ70 676 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 VN1R3Q9BXE9 311 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 TRIM9Q9C026 710 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-216ENST00000475195 ZBP1Q9H171 429 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 MAGEF1Q9HAY2 307 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 GDAQ9Y2T3 454 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 PCDHGC5Q9Y5F6 944 aa18.04■□□□□ 0.48
ATG4B-216ENST00000475195 FAM237AA0A1B0GTK4 181 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 K7ENM7 598 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 NR1I2O75469 434 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 CTSAP10619 480 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 GTF2F1P35269 517 aaKnown RBP eCLIP18.03■□□□□ 0.482e-8■■■■■ 34.1
ATG4B-216ENST00000475195 TUSC3Q13454 348 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 ZC2HC1CQ53FD0 456 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-216ENST00000475195 TJAP1Q5JTD0 557 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 SFR1Q86XK3 245 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 DHX58Q96C10 678 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 HVCN1Q96D96 273 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 PPP1R10Q96QC0 940 aaKnown RBP18.03■□□□□ 0.48
ATG4B-216ENST00000475195 RPS6KC1Q96S38 1066 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 C7orf25Q9BPX7 421 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 PYM1Q9BRP8 204 aaKnown RBP18.03■□□□□ 0.48
ATG4B-216ENST00000475195 COLEC11Q9BWP8 271 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 ZHX3Q9H4I2 956 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 KCNH3Q9ULD8 1083 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 STYXL1Q9Y6J8 313 aa18.03■□□□□ 0.48
ATG4B-216ENST00000475195 SMIM28A0A1B0GU29 152 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 FSD2A1L4K1 749 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 HIDE1A8MVS5 230 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 MEFVO15553 781 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-216ENST00000475195 FAM189A1O60320 539 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 LILRB3O75022 631 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 ADRB2P07550 413 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 OR1G1P47890 313 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
ATG4B-216ENST00000475195 DUSP6Q16828 381 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 LEXMQ3ZCV2 418 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 HERC4Q5GLZ8 1057 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-216ENST00000475195 TMEM184AQ6ZMB5 413 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 ZBTB33Q86T24 672 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 ACAP3Q96P50 834 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 TLE6Q9H808 572 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 TOPORSQ9NS56 1045 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-216ENST00000475195 PANK4Q9NVE7 773 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 HPSEQ9Y251 543 aa18.02■□□□□ 0.48
ATG4B-216ENST00000475195 TRIP11Q15643 1979 aa18.02■□□□□ 0.47
ATG4B-216ENST00000475195 A0A0B4J269 797 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 CXCL14O95715 111 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 KCNE1P15382 129 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 NRIP1P48552 1158 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 YARSP54577 528 aaKnown RBP18.01■□□□□ 0.47
ATG4B-216ENST00000475195 SMC1AQ14683 1233 aaKnown RBP18.01■□□□□ 0.47
ATG4B-216ENST00000475195 KYAT1Q16773 422 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 SLC10A6Q3KNW5 377 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 SLC39A4Q6P5W5 647 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 GPR65Q8IYL9 337 aa18.01■□□□□ 0.47
ATG4B-216ENST00000475195 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms